From: "Steve Simon" <steve@quintile.net>
To: 9fans@cse.psu.edu
Subject: Re: [9fans] strange behavior?
Date: Thu, 10 May 2007 09:18:23 +0100 [thread overview]
Message-ID: <eaa228acf925b7ef4371a2540284b426@quintile.net> (raw)
In-Reply-To: <ACCF003CBA3D09458207DB0CB86AD17D481B45@XMAIL.asuch.cas.cz>
> ##script:
> T = 'Eptatretus burgeri'
> echo $T
> awk '/'^$T^'/' all.uniq
> echo '++++++++++++++++'
> T=`{awk 'NR== '23' ' SpeciesList}
> echo $T
> awk '/'^$T^'/' all.uniq
> ## result:
> Eptatretus burgeri
> Eptatretus burgeri (complete) Metazoa; Chordata; Craniata; Hyperotreti; Myxiniformes; Myxinidae; Eptatretinae; Eptatretus. NC_002807 cox1, -S(nga), D, cox2, K, atp8, atp6, cox3, G, nad3, R, nad4L, nad4, H, S(nct), L(nag), nad5, -nad6, -E, cob, T, -P, F, rrnS, V, rrnL, L(yaa), nad1, I, -Q, M, nad2, W, -A, -N, -C, -Y
> ++++++++++++++++
> Eptatretus burgeri
> awk: can't open file /burgeri/
> source line 1
> rc 117587: awk 117593: 2
I think this is a problem with rc treating $T as a list, and you need
a list flattening operator (double quote).
Perhaps what you need is
awk '/'^$"T^'/' all.uniq
[unsure as hasn't had any coffee yet]
-Steve
prev parent reply other threads:[~2007-05-10 8:18 UTC|newest]
Thread overview: 3+ messages / expand[flat|nested] mbox.gz Atom feed top
2007-05-10 6:45 cej
2007-05-10 8:16 ` Charles Forsyth
2007-05-10 8:18 ` Steve Simon [this message]
Reply instructions:
You may reply publicly to this message via plain-text email
using any one of the following methods:
* Save the following mbox file, import it into your mail client,
and reply-to-all from there: mbox
Avoid top-posting and favor interleaved quoting:
https://en.wikipedia.org/wiki/Posting_style#Interleaved_style
* Reply using the --to, --cc, and --in-reply-to
switches of git-send-email(1):
git send-email \
--in-reply-to=eaa228acf925b7ef4371a2540284b426@quintile.net \
--to=steve@quintile.net \
--cc=9fans@cse.psu.edu \
/path/to/YOUR_REPLY
https://kernel.org/pub/software/scm/git/docs/git-send-email.html
* If your mail client supports setting the In-Reply-To header
via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line
before the message body.
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for NNTP newsgroup(s).