ntg-context - mailing list for ConTeXt users
 help / color / mirror / Atom feed
From: Pau <vim.unix@googlemail.com>
To: mailing list for ConTeXt users <ntg-context@ntg.nl>
Subject: Re: Bibtex problems
Date: Wed, 28 Jan 2009 22:43:40 +0100	[thread overview]
Message-ID: <30c383e70901281343s53a6da2ex70bbcf3bdf0b50cc@mail.gmail.com> (raw)
In-Reply-To: <30c383e70901270142m638a28ekce57efb692c20f4@mail.gmail.com>

I don't know why, but doing this:

\usemodule[bib]
\usemodule[bibltx]
\setupbibtex[database=cole]
%\setuppublications[numbering=yes, sort=author, criterium=all]

and then

\completepublications

then cleaning the garbage,

rm *mp* GW2.bib GW2.blg GW2.log GW2.bbl GW2.aux GW2.tmp GW2.tui GW2.tuo

fixed it...

anyway... I hope this helps somebody

Pau



2009/1/27 Pau <vim.unix@googlemail.com>:
> Hello,
>
> I have followed the indications of the wiki. In my document, I have:
>
>
> \usemodule[bib]
> \usemodule[bibltx]
> \setupbibtex[database=cole]
> \setuppublications[numbering=yes, sort=author, criterium=all]
>
> where cole.bib contains entries such as
>
> -------------------
> @ARTICLE{Baker07,
>   author = {{Baker}, J.~G. and {Boggs}, W.~D. and {Centrella}, J. and
> {Kelly}, B.~J. and
>        {McWilliams}, S.~T. and {Miller}, M.~C. and {van Meter}, J.~R.
>        },
>    title = "{Modeling Kicks from the Merger of Nonprecessing Black
> Hole Binaries}",
>  journal = {Astrophysical Journal},
>   eprint = {arXiv:astro-ph/0702390},
>  keywords = {Black Hole Physics, Galaxies: Nuclei, Gravitational
> Waves, Relativity},
>     year = 2007,
>    month = oct,
>   volume = 668,
>    pages = {1140-1144},
>      doi = {10.1086/521330},
>   adsurl = {http://adsabs.harvard.edu/abs/2007ApJ...668.1140B},
>  adsnote = {Provided by the SAO/NASA Astrophysics Data System}
> }
>
> @ARTICLE{Baker08,
>   author = {{Baker}, J.~G. and {Boggs}, W.~D. and {Centrella}, J. and
> {Kelly}, B.~J. and
>        {McWilliams}, S.~T. and {Miller}, M.~C. and {van Meter}, J.~R.
>        },
>    title = "{Modeling Kicks from the Merger of Generic Black Hole Binaries}",
>  journal = {Astrophysical Journal},
> archivePrefix = "arXiv",
>   eprint = {0802.0416},
>  keywords = {Black Hole Physics, Galaxies: Nuclei, Gravitational
> Waves, Relativity},
>     year = 2008,
>    month = jul,
>   volume = 682,
>    pages = {L29-L32},
>      doi = {10.1086/590927},
>   adsurl = {http://adsabs.harvard.edu/abs/2008ApJ...682L..29B},
>  adsnote = {Provided by the SAO/NASA Astrophysics Data System}
> }
> ---------------------------------------------------------------
>
> Later in the ConTeXt document, I have
>
> \completepublications[criterium=all]
>
> Nevertheless, when I try to texexec it, I get:
>
> ------------------------------------------------------------------
> Completed box being shipped out [11.10]
> Memory usage before: 12219&652992; after: 3054&650077; still untouched: 2428943
>
> title           : - References
> ! Undefined control sequence.
> \@@pb@journal ->\apj
>
> <argument> ... \it \csname @@pb@journal\endcsname
>                                                  \egroup
> \firstoftwoarguments #1#2->#1
>
> \@@pvdataarticle ... } {\insertcrossref {In }{}{}}
>                                                  \insertvolume {, } {\inser...
>
> \dotypesetapublication ...ve {\getvalue {pbdt-#1}}
>                                                  \fi \egroup
> <argument> ...etapublication {2007ApJ...668.1140B}
>                                                  \strut
> ...
> l.906 \completepublications[criterium=all]
> ?
> -------------------------------------------------------------------------------
>
> \apj is the shortcut used in bibtex for Astrophysical Journal but, as
> you can see, I have substituted it for the full name everywhere in the
> cole.bib file
>
> As a matter of fact, and just in case of,
>
> grep 'apj' GW2.tex
>
> and
>
> grep 'apj' cole.bib
>
> yield nothing
>
>
> A bit more of information: This is
>
> spree(p3)| uname -a
> OpenBSD spree 4.4 GENERIC#1638 i386
>
> and
>
> spree(p3)| texexec -v
> TeXExec | version 6.2.0 - 1997-2006 - PRAGMA ADE/POD
>
> The full output of texexec follows below. As you can see, there are a
> lot of warnings, but they look as they look when in LaTeX I compile
> for the first time the document. The warnings disappear when I
> recompile it, because it needs a second time. I'm not sure of the
> meaning in ConTeXt.
>
> Any hint?
>
> Help will be appreciated
>
> Pau
>
> -----------------------------------------------------
> spree(p3)| texexec GW2.tex
> TeXExec | processing document 'GW2.tex'
> TeXExec | no ctx file found
> TeXExec | tex processing method: context
> TeXExec | TeX run 1
> TeXExec | writing option file GW2.top
> TeXExec | using randomseed 534
> TeXExec | tex engine: pdftex
> TeXExec | tex format: cont-en
> This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7)
>  %&-line parsing enabled.
>  (/usr/local/share/texmf/web2c/natural.tcx)
> entering extended mode
> (./GW2.tex
>
> ConTeXt  ver: 2008.05.21 15:21 MKII  fmt: 2009.1.13  int: english/english
>
> language        : language en is active
> system          : cont-new loaded
> (/usr/local/share/texmf-dist/tex/context/base/cont-new.tex
> systems         : beware: some patches loaded from cont-new.tex
> (/usr/local/share/texmf-dist/tex/context/base/cont-new.mkii)
> (/usr/local/share/texmf-dist/tex/context/base/cont-mtx.tex))
> system          : cont-old loaded
> (/usr/local/share/texmf-dist/tex/context/base/cont-old.tex
> loading         : Context Old Macros
> )
> system          : cont-fil loaded
> (/usr/local/share/texmf-dist/tex/context/base/cont-fil.tex
> loading         : Context File Synonyms
> )
> system          : cont-sys loaded
> (/home/pau/treball/texinputs/cont-sys.tex
> (/usr/local/share/texmf-dist/tex/context/base/type-tmf.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-siz.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-one.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-akb.tex))
> bodyfont        : 12pt rm is loaded
> language        : patterns en->ec:ec->1->2:3 uk->ec:ec->2->2:3 de->texnansi:tex
> nansi->3->2:3 de->ec:ec->4->2:3 fr->texnansi:texnansi->5->2:3 fr->ec:ec->6->2:3
>  es->ec:ec->7->2:3 pt->texnansi:texnansi->8->2:3 pt->ec:ec->9->2:3 it->texnansi
> :texnansi->10->2:3 it->ec:ec->11->2:3 nl->texnansi:texnansi->12->2:3 nl->ec:ec-
>>13->2:3 cz->il2:il2->14->2:3 cz->ec:ec->15->2:3 sk->il2:il2->16->2:3 sk->ec:ec
> ->17->2:3 pl->pl0:pl0->18->2:3 pl->ec:ec->19->2:3 pl->qx:qx->20->2:3 loaded
> specials        : tex,postscript,rokicki loaded
> system          : GW2.top loaded
> (./GW2.top
> specials        : loading definition file tpd
> (/usr/local/share/texmf-dist/tex/context/base/spec-tpd.tex
> specials        : loading definition file fdf
> (/usr/local/share/texmf-dist/tex/context/base/spec-fdf.tex
> (/usr/local/share/texmf-dist/tex/context/base/spec-fdf.mkii))
> specials        : fdf loaded
> )
> specials        : fdf,tpd loaded
> )
> systems         : system commands are disabled
> system          : module mag-01 loaded
> (/usr/local/share/texmf-dist/tex/context/base/s-mag-01.tex
> specials        : loading definition file tpd
> (/usr/local/share/texmf-dist/tex/context/base/spec-tpd.tex
> specials        : loading definition file fdf
> (/usr/local/share/texmf-dist/tex/context/base/spec-fdf.tex
> (/usr/local/share/texmf-dist/tex/context/base/spec-fdf.mkii))
> specials        : fdf loaded
> )
> specials        : fdf,tpd loaded
> color           : mpcmyk color space is supported
> color           : mpspot color space is supported
> color           : system rgb is global activated
> (/usr/local/share/texmf-dist/tex/context/base/type-tmf.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-siz.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-one.tex
> (/usr/local/share/texmf-dist/tex/context/base/type-tmf.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-siz.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-one.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-akb.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-tmf.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-siz.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-one.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-akb.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-tmf.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-siz.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-one.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-akb.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-tmf.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-siz.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-one.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-akb.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-tmf.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-siz.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-one.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-akb.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-tmf.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-siz.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-one.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-akb.tex))
> (/usr/local/share/texmf-dist/tex/context/base/type-tmf.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-siz.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-one.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-akb.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-tmf.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-siz.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-one.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-akb.tex))
> (/usr/local/share/texmf-dist/tex/context/base/type-tmf.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-siz.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-one.tex)
> (/usr/local/share/texmf-dist/tex/context/base/type-akb.tex)
> system          : module bib loaded
> (/usr/local/share/texmf-dist/tex/context/bib/t-bib.tex
> publications    : loading formatting style from bibl-apa
> (/usr/local/share/texmf-dist/tex/context/bib/bibl-apa.tex))
> system          : module bibltx loaded
> (/usr/local/share/texmf-dist/tex/context/bib/t-bibltx.tex)
> publications    : wrote a new auxiliary file GW2.aux
> system          : module amsl not found
> system          : module newmat loaded
> (/usr/local/share/texmf-dist/tex/context/base/m-newmat.tex)
> interaction     : active
> system          : title,chapter,section not found/processed
> system          : title,chapter,section not found/processed
> (/usr/local/share/texmf-dist/tex/context/base/pdfr-def.tex)
> publications    : loading database from GW2.bbl
> (./GW2.bbl)
> systems         : begin file GW2 at line 342
>
> Underfull \hbox (badness 10000) in paragraph at lines 346--346
>  []| |\**\thedefinedfont**: January 2009
>
> Underfull \hbox (badness 10000) in paragraph at lines 346--346
>  []|\**\thedefinedfont**: Editors:
>
> Underfull \hbox (badness 10000) in paragraph at lines 346--346
>  []|\**\thedefinedfont**: P. A-S
> (./GW2-abstract.tmp
> fonts           : resetting map file list
> {/usr/local/share/texmf-dist/fonts/map/pdftex/context/original-empty.map}
> fonts           : using map file: original-base
> {/usr/local/share/texmf-dist/fonts/map/pdftex/context/original-base.map}
> fonts           : using map file: original-ams-base
> {/usr/local/share/texmf-dist/fonts/map/pdftex/context/original-ams-base.map}
> fonts           : using map file: original-public-lm
> {/usr/local/share/texmf-dist/fonts/map/pdftex/context/original-public-lm.map}
> fonts           : using map file: lm-ec
> {/usr/local/share/texmf-dist/fonts/map/dvips/lm/lm-ec.map}
> fonts           : using map file: lm-math
> {/usr/local/share/texmf-dist/fonts/map/dvips/lm/lm-math.map}
> fonts           : using map file: lm-rm
> {/usr/local/share/texmf-dist/fonts/map/dvips/lm/lm-rm.map}
> fonts           : using map file: 8r-base
> {/usr/local/share/texmf-dist/fonts/map/pdftex/context/8r-base.map}
> fonts           : using map file: ec-base
> {/usr/local/share/texmf-dist/fonts/map/pdftex/context/ec-base.map}
> fonts           : using map file: t5-base
> {/usr/local/share/texmf-dist/fonts/map/pdftex/context/t5-base.map}
> fonts           : using map file: original-ams-euler
> {/usr/local/share/texmf-dist/fonts/map/pdftex/context/original-ams-euler.map}
> fonts           : using map file: ec-urw-palatino
>
>
> pdfTeX warning: pdftex (file ec-urw-palatino.map): cannot open font map file
> fonts           : using map file: original-youngryu-px
> {/usr/local/share/texmf-dist/fonts/map/pdftex/context/original-youngryu-px.map}
>  <./AEI_Logo.jpg>
> figures         : dimensions of _Logo loaded from figurefile itself
> ) [MP GW2-mpgraph.4000] [MP GW2-mpgraph.3999]
> interaction     : aspect ratio 597.50787 x 845.04684 (b x h)
> (/usr/local/share/texmf-dist/tex/context/base/sort-def.tex
> (/usr/local/share/texmf-dist/tex/context/base/sort-def.mkii))
> (/usr/local/share/texmf-dist/tex/context/base/sort-lan.tex
> loading         : Context Sorting Macros (languages)
> (/usr/local/share/texmf-dist/tex/context/base/sort-lan.mkii))
> interaction     : pdftex code inserted
> [1.1]
> subject         : - Intention and purpose of GW Notes
> [MP GW2-mpgraph.3998] [2.1]
> subject         : - Philosophy behind: The Astro-GR meetings
> [MP GW2-mpgraph.3997] [3.2]
> metapost        : loading metapost library txt
> (/usr/local/share/texmf-dist/tex/context/base/meta-txt.tex) [MP GW2-mpgraph.1]
> [MP GW2-mpgraph.2] [MP GW2-mpgraph.3] [MP GW2-mpgraph.4] [MP GW2-mpgraph.5]
> [4.3]
> subject         : - GW Letters highlight article: Astrophysics
> section         : 1 Introduction
> section         : 2 Available frequencies
> [5.4]
> section         : 3 Quadrupolar evolution of circular orbits
> publications    : warning: cite argument Schutz97 is unknown on 139
> [6.5]
> publications    : warning: cite argument PM63 is unknown on 139
> publications    : warning: cite argument Peters64 is unknown on 139
> [7.6]
> section         : 4 Binary evolution in strong gravity
> [8.7]
> section         : 5 Merger and ringdown
> publications    : warning: cite argument Echeverria89 is unknown on 139
> [9.8]
> section         : 6 Gravitational radiation recoil
> publications    : warning: cite argument Per62 is unknown on 139
> publications    : warning: cite argument Bek73 is unknown on 139
> publications    : warning: cite argument Fit83 is unknown on 139
> publications    : warning: cite argument FD84 is unknown on 139
> publications    : warning: cite argument RR89 is unknown on 139
> publications    : warning: cite argument W92 is unknown on 139
> publications    : warning: cite argument FHH04 is unknown on 139
> publications    : warning: cite argument BQW05 is unknown on 139
> publications    : warning: cite argument DG06 is unknown on 139
> publications    : warning: cite argument SB07 is unknown on 139
> publications    : warning: cite argument BK08 is unknown on 139
> publications    : warning: cite argument BKN08 is unknown on 139
> publications    : warning: cite argument Schnittman08 is unknown on 139
> publications    : warning: cite argument RBK08 is unknown on 139
> publications    : warning: cite argument HSL07 is unknown on 139
> publications    : warning: cite argument Baker06 is unknown on 139
> publications    : warning: cite argument Herrmann07 is unknown on 139
> publications    : warning: cite argument Koppitz07 is unknown on 139
> publications    : warning: cite argument Campanelli07a is unknown on 139
> publications    : warning: cite argument Campanelli07b is unknown on 139
> publications    : warning: cite argument Gonzalez07a is unknown on 139
> publications    : warning: cite argument Gonzalez07b is unknown on 139
> publications    : warning: cite argument Baker07 is unknown on 139
> publications    : warning: cite argument LZ08a is unknown on 139
> publications    : warning: cite argument Baker08 is unknown on 139
> publications    : warning: cite argument LZ08b is unknown on 139
> publications    : warning: cite argument Bogdanovic07 is unknown on 139
> [10.9]
> section         : 7 Summary
> {vertical mode: \tracingstats}
> {\tracingpages}
> {\tracingoutput}
> {\tracinglostchars}
> {\tracingmacros}
> {\tracingparagraphs}
> {\tracingrestores}
> {\showboxbreadth}
> {\showboxdepth}
> {\tracinggroups}
> {\tracingifs}
> {\tracingscantokens}
> {\tracingnesting}
> {\tracingassigns}
> {into \tracingassigns=2}
> {\errorstopmode}
>
> {\tracingonline}
> {changing \tracingonline=1}
>
> Completed box being shipped out [11.10]
> Memory usage before: 12219&652992; after: 3054&650077; still untouched: 2428943
>
> title           : - References
> ! Undefined control sequence.
> \@@pb@journal ->\apj
>
> <argument> ... \it \csname @@pb@journal\endcsname
>                                                  \egroup
> \firstoftwoarguments #1#2->#1
>
> \@@pvdataarticle ... } {\insertcrossref {In }{}{}}
>                                                  \insertvolume {, } {\inser...
>
> \dotypesetapublication ...ve {\getvalue {pbdt-#1}}
>                                                  \fi \egroup
> <argument> ...etapublication {2007ApJ...668.1140B}
>                                                  \strut
> ...
> l.906 \completepublications[criterium=all]
>



-- 
Let there be peace on earth. And let it begin with misc
___________________________________________________________________________________
If your question is of interest to others as well, please add an entry to the Wiki!

maillist : ntg-context@ntg.nl / http://www.ntg.nl/mailman/listinfo/ntg-context
webpage  : http://www.pragma-ade.nl / http://tex.aanhet.net
archive  : https://foundry.supelec.fr/projects/contextrev/
wiki     : http://contextgarden.net
___________________________________________________________________________________


  reply	other threads:[~2009-01-28 21:43 UTC|newest]

Thread overview: 6+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2009-01-27  9:42 Pau
2009-01-28 21:43 ` Pau [this message]
2010-03-10  2:26 bibtex problems Tom
2010-03-10  7:52 ` Taco Hoekwater
2010-03-10 13:02   ` Tom
2010-03-10 16:37     ` Fernan Aguero

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=30c383e70901281343s53a6da2ex70bbcf3bdf0b50cc@mail.gmail.com \
    --to=vim.unix@googlemail.com \
    --cc=ntg-context@ntg.nl \
    --cc=vim.unix@gmail.com \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body. 
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for NNTP newsgroup(s).