Dear Yue and Taco,

Thank you both for replying. Here are the fonts that I am trying to  
get  from my source file (no problem using Minimals but when I use  
MacTeX installation that is when I get the problem). These are fonts  
for Irish Gaelic ancient and modern.
Below is a snippet that I get from the Minimals output. But MacTeX  
tries to make Latin Modern instead of giving me the output below. This  
is not urgent since I can use Minimals but I would still like to put  
MacTeX right. I have since uninstalled all of my TeX including  
minimals. I have deleted all the Latin Modern Fonts and did a clean  
install of MacTeX . The problem is still there.

Thanks again,
Charlie Doherty