From mboxrd@z Thu Jan 1 00:00:00 1970 X-Msuck: nntp://news.gmane.io/gmane.text.pandoc/11397 Path: news.gmane.org!not-for-mail From: Ben Temperton Newsgroups: gmane.text.pandoc Subject: Re: error after yosemite installation Date: Wed, 3 Dec 2014 11:57:26 -0800 (PST) Message-ID: <5d7e742f-d38f-4966-874c-354683f0c463@googlegroups.com> References: <9e0187a8-42dd-46ec-b225-aa207afb904a@googlegroups.com> <70ad36c3-559a-47d9-a198-07735f1984e0@googlegroups.com> Reply-To: pandoc-discuss-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org NNTP-Posting-Host: plane.gmane.org Mime-Version: 1.0 Content-Type: multipart/mixed; boundary="----=_Part_91_880052164.1417636646263" X-Trace: ger.gmane.org 1417636653 30139 80.91.229.3 (3 Dec 2014 19:57:33 GMT) X-Complaints-To: usenet@ger.gmane.org NNTP-Posting-Date: Wed, 3 Dec 2014 19:57:33 +0000 (UTC) To: pandoc-discuss-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org Original-X-From: pandoc-discuss+bncBD72TTFRUACRBJWW7WRQKGQEKIQVNUQ-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org Wed Dec 03 20:57:29 2014 Return-path: Envelope-to: gtp-pandoc-discuss@m.gmane.org Original-Received: from mail-yh0-f62.google.com ([209.85.213.62]) by plane.gmane.org with esmtp (Exim 4.69) (envelope-from ) id 1XwG3D-0007Tu-Gj for gtp-pandoc-discuss@m.gmane.org; Wed, 03 Dec 2014 20:57:27 +0100 Original-Received: by mail-yh0-f62.google.com with SMTP id a41sf2263025yho.7 for ; Wed, 03 Dec 2014 11:57:27 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=googlegroups.com; s=20120806; h=date:from:to:message-id:in-reply-to:references:subject:mime-version :content-type:x-original-sender:reply-to:precedence:mailing-list :list-id:list-post:list-help:list-archive:sender:list-subscribe :list-unsubscribe; bh=4uNEjwfRCh70txeijfr0YkBJV9zq3TUdIdIUplx6+2o=; b=JMkJAD23bRK/I6KsVDMxaJ2YmzmJ27fu3hTDKkuuXWOk7FzB9iQSW20Pvar+fQnCEU uUR6CHzaup+irINEXvdclmXV0sz/FsLIAydG+Ye/6SU6gaYldKYd7V2xBaYk71Pz0zLp PK/n+oz9thbQbzoJ8wACz92EdYP6Ft46GhYwaiVYGgnFsZMpKfNUFiPKOSpSrBPaeoyo tCxtI3bCezxTh4xcsvCc/7X91Vn910PYAxHFpSXMFP9mjEEP3FpKg1ndmGgpWcPbUe+m 4ZwTa9bxLJSXc5CciCL/5lJ/CRz6GmZhnTv8cvjjcsk8bmpowckzE52G45yO+N9rYWI5 zwbw== DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=date:from:to:message-id:in-reply-to:references:subject:mime-version :content-type:x-original-sender:reply-to:precedence:mailing-list :list-id:list-post:list-help:list-archive:sender:list-subscribe :list-unsubscribe; bh=4uNEjwfRCh70txeijfr0YkBJV9zq3TUdIdIUplx6+2o=; b=QKmc1a0YdoGPPhGR4T5rJbfH5buOXmPT6bnoYZM84Ac9H2iPTkwu1Ek1GJb3Bq9+DY e4xw0bX7m7+kYeWjgZOG8wzMpwVwCgmWTLcLn7LEcHkXRhMfJxV0LyfqkBAymg2UTQCj 8fuox9pU8TMVZFhgBdIch/t+S6IVmNL4tdeBzrZIHsDTAP1IjwLJrM1vK9zwxm7EVMv4 WMq2IN6OyTEc/vnqMcd8wvH1NpgEIgbrwgYzuljLm4qVwX7MJkpr7D5bVNE/mvn1dnm/ VLS3IzNpYvJZ/2zUMnhOvccnujnqZ+dF0QvMUHdDzgUmuTyFHXoVmfOgsObOLtmOmfOS 2XiQ== X-Received: by 10.140.87.100 with SMTP id q91mr30258qgd.39.1417636646984; Wed, 03 Dec 2014 11:57:26 -0800 (PST) X-BeenThere: pandoc-discuss-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org Original-Received: by 10.140.33.131 with SMTP id j3ls878124qgj.14.gmail; Wed, 03 Dec 2014 11:57:26 -0800 (PST) X-Received: by 10.140.104.145 with SMTP id a17mr34454qgf.16.1417636646617; Wed, 03 Dec 2014 11:57:26 -0800 (PST) In-Reply-To: <70ad36c3-559a-47d9-a198-07735f1984e0-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org> X-Original-Sender: btemperton-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org Precedence: list Mailing-list: list pandoc-discuss-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org; contact pandoc-discuss+owners-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org List-ID: X-Google-Group-Id: 1007024079513 List-Post: , List-Help: , List-Archive: , List-Unsubscribe: , Xref: news.gmane.org gmane.text.pandoc:11397 Archived-At: ------=_Part_91_880052164.1417636646263 Content-Type: multipart/alternative; boundary="----=_Part_92_1316843459.1417636646263" ------=_Part_92_1316843459.1417636646263 Content-Type: text/plain; charset=UTF-8 Quick follow up to this - I noticed that pandoc was working fine in Rstudio for conversion of R markdown. If you mimic the command used by RStudio to generate the pdf on the command line, it works fine. pandoc SCG.protocol.md --to latex --from markdown+autolink_bare_uris+ascii_identifiers+tex_math_single_backslash-implicit_figures --output SCG.protocol.pdf --filter pandoc-citeproc --template /Library/Frameworks/R.framework/Versions/3.0/Resources/library/rmarkdown/rmd/latex/default.tex --highlight-style tango --latex-engine /usr/texbin/pdflatex --variable 'geometry:margin=1in' --bibliography SCG.protocol.bib Not sure if this provides any more insight to the original issue. -- You received this message because you are subscribed to the Google Groups "pandoc-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to pandoc-discuss+unsubscribe-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org To post to this group, send email to pandoc-discuss-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org To view this discussion on the web visit https://groups.google.com/d/msgid/pandoc-discuss/5d7e742f-d38f-4966-874c-354683f0c463%40googlegroups.com. For more options, visit https://groups.google.com/d/optout. ------=_Part_92_1316843459.1417636646263 Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable
Quick follow up to this - I noticed that pandoc was workin= g fine in Rstudio for conversion of R markdown. If you mimic the command us= ed by RStudio to generate the pdf on the command line, it works fine.
pandoc SCG.protocol.md --to latex --from markdown+autolink_bare_uris+asci= i_identifiers+tex_math_single_backslash-implicit_figures --output SCG.proto= col.pdf --filter pandoc-citeproc --template /Library/Frameworks/R.framework= /Versions/3.0/Resources/library/rmarkdown/rmd/latex/default.tex --highlight= -style tango --latex-engine /usr/texbin/pdflatex --variable 'geometry:margi= n=3D1in' --bibliography SCG.protocol.bib

Not sure if this provides a= ny more insight to the original issue.

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