From mboxrd@z Thu Jan 1 00:00:00 1970 X-Msuck: nntp://news.gmane.io/gmane.text.pandoc/28482 Path: news.gmane.io!.POSTED.blaine.gmane.org!not-for-mail From: Julio Vera Newsgroups: gmane.text.pandoc Subject: Re: Pandoc stopped rendering tables and contents from the YAML block Date: Fri, 28 May 2021 08:03:13 -0700 (PDT) Message-ID: <74450a6b-43ad-4780-90d6-80f51c203f1fn@googlegroups.com> References: <1abeeca5-7362-441d-907a-08df53958b28n@googlegroups.com> <932560f4-7866-4fd4-90e7-4797e23fab20n@googlegroups.com> Reply-To: pandoc-discuss-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org Mime-Version: 1.0 Content-Type: multipart/mixed; boundary="----=_Part_882_1982424146.1622214193703" Injection-Info: ciao.gmane.io; posting-host="blaine.gmane.org:116.202.254.214"; logging-data="24740"; mail-complaints-to="usenet@ciao.gmane.io" To: pandoc-discuss Original-X-From: pandoc-discuss+bncBD3Y3JUZQABBBM4MYSCQMGQEDVFTPUA-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org Fri May 28 17:03:19 2021 Return-path: Envelope-to: gtp-pandoc-discuss@m.gmane-mx.org Original-Received: from mail-oo1-f64.google.com ([209.85.161.64]) by ciao.gmane.io with esmtps (TLS1.3:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.92) (envelope-from ) id 1lme17-0006Bf-B3 for gtp-pandoc-discuss@m.gmane-mx.org; Fri, 28 May 2021 17:03:17 +0200 Original-Received: by mail-oo1-f64.google.com with SMTP id d12-20020a4aeb8c0000b029023bbaaddcbbsf2474453ooj.13 for ; Fri, 28 May 2021 08:03:17 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=googlegroups.com; s=20161025; h=sender:date:from:to:message-id:in-reply-to:references:subject :mime-version:x-original-sender:reply-to:precedence:mailing-list :list-id:list-post:list-help:list-archive:list-subscribe :list-unsubscribe; bh=NvK/r8lLt/dgB/eNVd78R7yOO80+xrToX0vRsLwzais=; b=InE1CNPqJC+x3hHc4cOtdSNPixcyeEiFs53U6YCyGk1m2uwSjAg/xUukx+/QdPScuw w2KLRLW7dghI0/+ucIKbvLnW0OM17l2eH7zd1X8G2PnCD9/32ordt8rWXXUYXKGyMAFa 4QM3xVTF5G0ABamkS7uy5eKdSsg0um3k5kwnb0Kkvik5xPgiUgquDG3OnT7dKhv5CpwT x0O5s0CR9QX8CgIt6bqc+K2m32rogli9/AJ7qeinNLAEfFMGnY5YSEGnFtCXGmh9qfVD J1ryFACtGgFqjL3znFI4AQ6IYqKyYC3LxfuGbSXBNQXAiAPFYGKmmXvOKKmhx0RjiSlh HCgA== DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=date:from:to:message-id:in-reply-to:references:subject:mime-version :x-original-sender:reply-to:precedence:mailing-list:list-id :list-post:list-help:list-archive:list-subscribe:list-unsubscribe; bh=NvK/r8lLt/dgB/eNVd78R7yOO80+xrToX0vRsLwzais=; b=Vus3nbPdYpEwSWje2Ws0kRY+eyDYwIxnDDH9Zoyz3RBqz8iLuoaoY/E3NOVHuMCVrR qVLYIyfDLZavAgS6dG6y+wNeSmGCyGzAMhwqvg1RT9x0viHx8jfWiBB+I70ywwlW4qS4 EavrFXA+AUy72B1YA5oUbfBxX2nZdKKR+VGhd0DQ1kT/1AqrT/zy9ItMR1D6/pTnlHq8 o9rZ3fFOogSgcChQburp2RdaMze9kVkwj6Blc3UG/47VQ/aWeekAj5TZbsfIVffHp37Y bA+17QQrOiBy8/XcROBF6UahR0SDx0audG/fStBqOVXwVWc8t7ikSCc0vb65Mlw0icUP BIAw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=sender:x-gm-message-state:date:from:to:message-id:in-reply-to :references:subject:mime-version:x-original-sender:reply-to :precedence:mailing-list:list-id:x-spam-checked-in-group:list-post :list-help:list-archive:list-subscribe:list-unsubscribe; bh=NvK/r8lLt/dgB/eNVd78R7yOO80+xrToX0vRsLwzais=; b=qcAsszdDeIHIHZX1DzPqqpRVs8UWuZdoPgNBYxwpsIesfRGz976gRusxqX8XcK59fB rbQ4oH6QODKr3uV/HaFUS25igNMIuWE5gud3VoRFgsls0J8wnp8R5MdSC3CDIZWj397M h6u+3M7g90lb+IHOBwGPas0GxKSW1UZ/wOMFWr5lcJsCI9NeRiRl+ZGfr7PByIRSGZ72 2a02+S/ioTHvzwvyliFg8+mblilTaoXr89c9lJcAIPk7A0Rolo++uogBJV5f1XKzwo1h 1mD3i+oD5L0jSvevs8mNDeoPtY2JsHoI3U299iG+To5O5Ep3wagyhf4ALuT9WKJpiLxo MV6w== Original-Sender: pandoc-discuss-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org X-Gm-Message-State: AOAM532dsJ6HwFh0Gy8CkXnCOSi5qGfo3Oj4D87ojdZslxgjHu363lCm wKMpk2RhkdIYfGU0gegkF0s= X-Google-Smtp-Source: ABdhPJyFnEUsx7agqFkaUzRdzIVOBBdD6CxBdSAGPaIpzhF41mxsEgL99+LvYGvgxs7WdMo1u7ZMrg== X-Received: by 2002:a05:6808:2d2:: with SMTP id a18mr6292973oid.82.1622214196289; Fri, 28 May 2021 08:03:16 -0700 (PDT) X-BeenThere: pandoc-discuss-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org Original-Received: by 2002:a9d:7858:: with SMTP id c24ls2113246otm.6.gmail; Fri, 28 May 2021 08:03:14 -0700 (PDT) X-Received: by 2002:a9d:170e:: with SMTP id i14mr7300251ota.356.1622214194347; Fri, 28 May 2021 08:03:14 -0700 (PDT) In-Reply-To: X-Original-Sender: avenzecock-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org Precedence: list Mailing-list: list pandoc-discuss-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org; contact pandoc-discuss+owners-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org List-ID: X-Google-Group-Id: 1007024079513 List-Post: , List-Help: , List-Archive: , List-Unsubscribe: , Xref: news.gmane.io gmane.text.pandoc:28482 Archived-At: ------=_Part_882_1982424146.1622214193703 Content-Type: multipart/alternative; boundary="----=_Part_883_78613668.1622214193703" ------=_Part_883_78613668.1622214193703 Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable I never created this folder ~/.pandoc or this one ~/.local/share/pandoc. I= =20 made a quick google search and found that I was expected to create those=20 directories, I never found the guidelines in the documentation tho. So=20 answering your question, I don't have a reference.docx because I haven't=20 created those directories. thank you El jueves, 27 de mayo de 2021 a las 16:16:27 UTC-5, John MacFarlane=20 escribi=C3=B3: > > Do you have a folder ~/.pandoc or ~/.local/share/pandoc that > contains reference.docx? > > Julio Vera writes: > > > Hi! I don't understand what about the "reference.docx", but in my folde= r=20 > > where I have the .md file I only have another .pdf file.=20 > > > > The command I use is: pandoc pxdxcomp.md -o pxdxcomp.docx > > El jueves, 27 de mayo de 2021 a las 14:04:36 UTC-5, John MacFarlane=20 > > escribi=C3=B3: > > > >> Also, please let us know the full command you are using to > >> convert (including any options). > >> > >> John MacFarlane writes: > >> > >> > Make sure you don't have a reference.docx in your user data > >> > directory. > >> > > >> > Julio Vera writes: > >> > > >> >> The latest one available in pandoc.org, I ran the script to=20 > uninstall=20 > >> it=20 > >> >> and then downloaded it again for macOS.=20 > >> >> > >> >> I tested again with this file (prueba.md) that I created just to se= e=20 > if=20 > >> it=20 > >> >> woks with new files but I got the same result. > >> >> > >> >> [image: Captura de Pantalla 2021-05-27 a la(s) 12.54.14.png] > >> >> However, when I convert the dxprevcovid19.md to .docx the table=20 > there=20 > >> >> renders fine.=20 > >> >> > >> >> El jueves, 27 de mayo de 2021 a las 12:49:09 UTC-5, John MacFarlane= =20 > >> >> escribi=C3=B3: > >> >> > >> >>> > >> >>> That's very strange -- it looks like it is using extremely narrow > >> >>> columns. But I can't reproduce this with latest pandoc. It > >> >>> looks fine. What version are you using? > >> >>> > >> >>> Julio Vera writes: > >> >>> > >> >>> > [image: Captura de Pantalla 2021-05-27 a la(s) 12.27.20.png] > >> >>> > > >> >>> > Corrected it, but the tables are still not rendering. That's how= =20 > I=20 > >> see=20 > >> >>> the=20 > >> >>> > tables inside the docx just for that file (pxdxcomp.md), when I= =20 > >> convert=20 > >> >>> it=20 > >> >>> > to pdf they render fine.=20 > >> >>> > > >> >>> > El jueves, 27 de mayo de 2021 a las 12:17:28 UTC-5, John=20 > MacFarlane=20 > >> >>> > escribi=C3=B3: > >> >>> > > >> >>> >> > >> >>> >> Looks like you've got four ---- instead of three --- under the > >> >>> >> YAML metadata block. > >> >>> >> > >> >>> >> > >> >>> >> Julio Vera writes: > >> >>> >> > >> >>> >> > Hi!=20 > >> >>> >> > > >> >>> >> > I attached 2 files. The one that I can't convert correctly is= =20 > >> >>> >> pxdxcomp.md,=20 > >> >>> >> > the other one (dxprevcovid) I tried to convert it and had no= =20 > >> issue.=20 > >> >>> The=20 > >> >>> >> > language of my work is in Spanish, I hope it isn't an issue= =20 > here.=20 > >> I=20 > >> >>> >> tried=20 > >> >>> >> > copying everything and pasting it inside a new file but still= =20 > >> have=20 > >> >>> the=20 > >> >>> >> same=20 > >> >>> >> > problem, also I uninstalled and installed pandoc. > >> >>> >> > > >> >>> >> > El jueves, 27 de mayo de 2021 a las 12:00:09 UTC-5, John=20 > >> MacFarlane=20 > >> >>> >> > escribi=C3=B3: > >> >>> >> > > >> >>> >> >> > >> >>> >> >> Not much we can do to help without seeing the input markdown= =20 > >> file... > >> >>> >> >> > >> >>> >> >> Julio Vera writes: > >> >>> >> >> > >> >>> >> >> > I usually just ran the following command: > >> >>> >> >> > > >> >>> >> >> > pandoc nameofile.md --citeproc -o nameofile.docx > >> >>> >> >> > > >> >>> >> >> > But today I was working with a particular .md file and=20 > after I=20 > >> >>> >> finished=20 > >> >>> >> >> > with it I tried to convert it, but the title, date and=20 > author=20 > >> >>> >> parameters=20 > >> >>> >> >> > that go inside the YAML block aren't converted, they=20 > display=20 > >> like=20 > >> >>> >> this: > >> >>> >> >> > > >> >>> >> >> > title: title of the document > >> >>> >> >> > author: myname > >> >>> >> >> > date: today > >> >>> >> >> > > >> >>> >> >> > But just in that format, not like it used to do. And also= =20 > the=20 > >> >>> tables=20 > >> >>> >> >> aren't=20 > >> >>> >> >> > formatted, they and up in the docs like this: > >> >>> >> >> > > >> >>> >> >> > p t > >> >>> >> >> > r 2 > >> >>> >> >> > 1 2 > >> >>> >> >> > 2 2 > >> >>> >> >> > > >> >>> >> >> > Just to say an example. I don't know hat happened. > >> >>> >> >> > > >> >>> >> >> > --=20 > >> >>> >> >> > You received this message because you are subscribed to th= e=20 > >> Google=20 > >> >>> >> >> Groups "pandoc-discuss" group. > >> >>> >> >> > To unsubscribe from this group and stop receiving emails= =20 > from=20 > >> it,=20 > >> >>> >> send=20 > >> >>> >> >> an email to pandoc-discus...-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org > >> >>> >> >> > To view this discussion on the web visit=20 > >> >>> >> >>=20 > >> >>> >>=20 > >> >>>=20 > >>=20 > https://groups.google.com/d/msgid/pandoc-discuss/1abeeca5-7362-441d-907a-= 08df53958b28n%40googlegroups.com > >> >>> >> >> . > >> >>> >> >> > >> >>> >> > > >> >>> >> > --=20 > >> >>> >> > You received this message because you are subscribed to the= =20 > >> Google=20 > >> >>> >> Groups "pandoc-discuss" group. > >> >>> >> > To unsubscribe from this group and stop receiving emails from= =20 > it,=20 > >> >>> send=20 > >> >>> >> an email to pandoc-discus...-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org > >> >>> >> > To view this discussion on the web visit=20 > >> >>> >>=20 > >> >>>=20 > >>=20 > https://groups.google.com/d/msgid/pandoc-discuss/eaeda4d3-c7f4-430f-b569-= e2fee781b831n%40googlegroups.com > >> >>> >> . > >> >>> >> > --- > >> >>> >> > title: Diagn=C3=B3stico situacional sobre la prevalencia de= =20 > SARS-COV-2=20 > >> en=20 > >> >>> >> perros, gatos y hurones de propietarios previamente=20 > diagn=C3=B3sticados=20 > >> con=20 > >> >>> el=20 > >> >>> >> virus. > >> >>> >> > author: Julio Vera de Le=C3=B3n > >> >>> >> > date: 25/Mayo/2021 > >> >>> >> > bibliography: proyecto.bib > >> >>> >> > csl: vca.csl > >> >>> >> > --- > >> >>> >> > > >> >>> >> > # T=C3=ADtulo > >> >>> >> > **H. CONSEJO T=C3=89CNICO DE LA FACULTAD** > >> >>> >> > **DE MEDICINA VETERINARIA Y ZOOTECNIA** > >> >>> >> > > >> >>> >> > **Presente** > >> >>> >> > > >> >>> >> > =C3=89l que suscribe, **Julio Vera de Le=C3=B3n**, alumnos de= la=20 > Maestr=C3=ADa=20 > >> en=20 > >> >>> >> Medicina Veterinaria y Zootecnia en el =C3=A1rea de Salud P=C3= =BAblica y=20 > >> Medicina=20 > >> >>> >> Preventiva, con n=C3=BAmero de cuenta 52101425-4. Pone a su=20 > >> consideraci=C3=B3n el=20 > >> >>> >> siguiente tema para diagn=C3=B3stico de situaci=C3=B3n: > >> >>> >> > > >> >>> >> > **Diagn=C3=B3stico situacional sobre la prevalencia de SARS-C= OV-2=20 > en=20 > >> >>> perros,=20 > >> >>> >> gatos y hurones de propietarios previamente diagn=C3=B3sticados= con=20 > el=20 > >> >>> virus.** > >> >>> >> > > >> >>> >> > Que ser=C3=A1 realizado en el **Departamento de Medicina Prev= entiva=20 > y=20 > >> >>> Salud=20 > >> >>> >> P=C3=BAblica de la Facultad de Medicina Veterinaria y Zootecnia= de la=20 > >> UNAM**=20 > >> >>> y=20 > >> >>> >> que pertenece al campo de profundizaci=C3=B3n profesional: **Me= dicina=20 > >> >>> Preventiva=20 > >> >>> >> y Salud P=C3=BAblica**. Bajo la asesor=C3=ADa del comit=C3=A9 t= utor conformado=20 > por=20 > >> el=20 > >> >>> >> **Dr. MSP Juan Ram=C3=B3n Ayala Torres**, la **MCV. Patricia Mo= ra=20 > >> Medina** y=20 > >> >>> el=20 > >> >>> >> **MCV. Jorge Francisco Monroy L=C3=B3pez** > >> >>> >> > > >> >>> >> > # Introducci=C3=B3n > >> >>> >> > > >> >>> >> > El sustento de este diagn=C3=B3stico de situaci=C3=B3n viene = de que a la=20 > >> fecha=20 > >> >>> es=20 > >> >>> >> desconocido por el autor alg=C3=BAn material bibliogr=C3=A1fico= o de=20 > consulta=20 > >> en=20 > >> >>> el=20 > >> >>> >> que se tengan datos referentes al n=C3=BAmero de animales que h= an=20 > sido=20 > >> >>> >> infectados por el s=C3=ADndrome respiratorio agudo severo coron= avirus=20 > 2=20 > >> >>> >> (SARS-COV-2). Esto a pesar de que la infecci=C3=B3n en los anim= ales=20 > por=20 > >> >>> >> SARS-COV-2 cumple los criterios de la OIE como enfermedad=20 > >> emergente.[^1] > >> >>> >> > > >> >>> >> > Es relevante tener datos que nos permitan conocer la=20 > prevalencia=20 > >> del=20 > >> >>> >> agente en los animales de compa=C3=B1=C3=ADa con los que manten= emos una=20 > >> relaci=C3=B3n=20 > >> >>> m=C3=A1s=20 > >> >>> >> cercana. > >> >>> >> > > >> >>> >> > [^1]: Enfermedad emergente por la OIE: La aparici=C3=B3n de u= na=20 > >> >>> enfermedad,=20 > >> >>> >> infecci=C3=B3n o infestaci=C3=B3n nueva y que impacta en la san= idad animal=20 > o=20 > >> la=20 > >> >>> salud=20 > >> >>> >> humana. > >> >>> >> > > >> >>> >> > A la fecha existen al menos 4 distintas instituciones en=20 > Am=C3=A9rica=20 > >> que=20 > >> >>> >> est=C3=A1n realizando estudios de muestreo para conocer la cant= idad=20 > de=20 > >> >>> animales=20 > >> >>> >> de compa=C3=B1ia infectados por contacto con sus propietarios, = las=20 > >> cuales=20 > >> >>> son: > >> >>> >> > > >> >>> >> > 1. [Ontario Veterinary College, University of Guelph]( > >> >>> >> https://ovc.uoguelph.ca) > >> >>> >> > 2. [Cummings School of Veterinary Medicine at Tufts=20 > University]( > >> >>> >> https://sites.tufts.edu/covers/) > >> >>> >> > 3. [Texas A&M University, College of Veterinary Medicine &=20 > >> Biomedical=20 > >> >>> >> Sciences]( > https://vetmed.tamu.edu/hamer-lab/covid-19-pets-research/ > >> ) > >> >>> >> > 4. [University of Washington Center for One Health Research]( > >> >>> >> https://deohs.washington.edu/cohr/covid-19-and-pets-study-caps) > >> >>> >> > > >> >>> >> > La evidencia apunta a que la epidemia provocada por SARS-COV-= 2=20 > se=20 > >> >>> >> mantiene principalmente por la transmisi=C3=B3n de humanos haci= a=20 > otros=20 > >> >>> humanos,=20 > >> >>> >> por lo que en este estudio el enfoque ser=C3=A1 conocer la cant= idad=20 > de=20 > >> >>> animales=20 > >> >>> >> que han sido infectados por sus propietarios, factores que=20 > >> >>> contribuyeron a=20 > >> >>> >> la infecci=C3=B3n, y conocer los tipos de casa en los que hubo = m=C3=A1s=20 > >> riesgo de=20 > >> >>> >> infecci=C3=B3n a las mascotas. Aunado a lo anterior, la OIE no= =20 > descarta=20 > >> a=20 > >> >>> los=20 > >> >>> >> animales salvajes y dom=C3=A9sticos como reservorios futuros de= la=20 > >> >>> enfermedad y=20 > >> >>> >> que puedan representar un problema para la salud p=C3=BAblica, = por lo=20 > >> que=20 > >> >>> >> sugiere el monitoreo cercano de las especies con las que m=C3= =A1s=20 > >> >>> convivimos. De=20 > >> >>> >> igual forma, la introducci=C3=B3n constante del virus a nuevas= =20 > >> poblaciones=20 > >> >>> >> animales puede llevar a mutaciones que puedan afectar la sanida= d=20 > >> animal=20 > >> >>> o=20 > >> >>> >> salud humana. > >> >>> >> > > >> >>> >> > A la fecha la OIE cuenta con informaci=C3=B3n referente a las= =20 > especies=20 > >> de=20 > >> >>> >> inter=C3=A9s en este diagn=C3=B3stico en cu=C3=A1nto a la susce= ptibilidad que=20 > >> tienen=20 > >> >>> al=20 > >> >>> >> virus, se pone en la siguiente tabla:[@OIE2021] > >> >>> >> > > >> >>> >> > | Especie | Tipo de infecci=C3=B3n | Susceptibilidad a la inf= ecci=C3=B3n=20 > |=20 > >> >>> Signos=20 > >> >>> >> cl=C3=ADnicos | Transmisi=C3=B3n | > >> >>> >> > | ------------------ | ---------------------- |=20 > >> >>> >> ------------------------------ | -------------------------- |= =20 > >> >>> >> ----------------- | > >> >>> >> > | Hurones | Natural y experimental | Alta | S=C3=AD (s=C3=B3l= o en=20 > algunos=20 > >> >>> casos) |=20 > >> >>> >> S=C3=AD, entre hurones | > >> >>> >> > | Gatos (dom=C3=A9sticos) | Natural y experimental | Alta | S= =C3=AD=20 > (s=C3=B3lo=20 > >> en=20 > >> >>> >> algunos casos) | S=C3=AD, entre gatos | > >> >>> >> > | Perros | Natural y experimental | Baja | S=C3=AD (s=C3=B3lo= en algunos=20 > >> casos)=20 > >> >>> |=20 > >> >>> >> No | > >> >>> >> > Table: SARS-COV-2 en Hurones, perros y gatos (adaptado de la= =20 > OIE) > >> >>> >> > > >> >>> >> > A pesar de que la informaci=C3=B3n actual ha mencionado que l= a=20 > >> epidemia se=20 > >> >>> >> mantiene por medio de la transmisi=C3=B3n humano-humano, no se = puede=20 > >> >>> descartar=20 > >> >>> >> como un componente de esta cadena de transmisi=C3=B3n a los ani= males=20 > de=20 > >> >>> >> compa=C3=B1ia, aunque su papel de momento sea mucho menos relev= ante.=20 > De=20 > >> ah=C3=AD=20 > >> >>> que=20 > >> >>> >> una de las indicaciones que contempla la CDC sea la de mantener= =20 > a=20 > >> los=20 > >> >>> >> animales separados junto con su propietario y reconoce el riesg= o=20 > de=20 > >> >>> >> transmisi=C3=B3n desde la mascota es bajo. [@CDC2021] > >> >>> >> > > >> >>> >> > # Justificaci=C3=B3n > >> >>> >> > > >> >>> >> > La detecci=C3=B3n del material gen=C3=A9tico del virus de SAR= S-COV-2 en=20 > >> perros=20 > >> >>> y=20 > >> >>> >> gatos se ha demostrado en animales con y sin signolog=C3=ADa, a= s=C3=AD=20 > como=20 > >> >>> tambi=C3=A9n=20 > >> >>> >> en el suero de mascotas que se han muestreado en zonas=20 > afectadas,=20 > >> por=20 > >> >>> lo=20 > >> >>> >> que la infecci=C3=B3n en estas especies est=C3=A1 comprobada, y= m=C3=A1s=20 > >> importante se=20 > >> >>> ha=20 > >> >>> >> comprobado que llegan a diseminar material viral con una=20 > cantidad=20 > >> >>> necesaria=20 > >> >>> >> que ha demostrado ser capaz de infectar a otros animales con lo= s=20 > >> que=20 > >> >>> >> conviven. @Patterson2020 > >> >>> >> > > >> >>> >> > En contraste con lo mencionado anteriormente, las especies de= =20 > >> >>> producci=C3=B3n=20 > >> >>> >> como cerdos (*Sus scropha*) y aves (gallinas, patos y pavos) ha= n=20 > >> >>> demostrado=20 > >> >>> >> de nula a extremadamente baja susceptiblidad de infecci=C3=B3n = de=20 > manera=20 > >> >>> >> experimental, adem=C3=A1s de que no se ha comprobado sean capac= es de=20 > >> >>> transmitir=20 > >> >>> >> la enfermedad. @Shi2020 De manera similar los bovinos (*Bos=20 > >> taurus*)=20 > >> >>> que se=20 > >> >>> >> han inoculado experimentalmente con el agente viral han=20 > demostrado=20 > >> una=20 > >> >>> >> susceptibilidad baja al agente y nula capacidad de transmisi=C3= =B3n=20 > del=20 > >> >>> mismo.=20 > >> >>> >> @Ulrich2020=20 > >> >>> >> > > >> >>> >> > Debido a que las especies usadas com=C3=BAnmente en la ganade= r=C3=ADa no=20 > >> han=20 > >> >>> >> demostrado ser suceptibles al virus, se decide enfocar el=20 > >> diagn=C3=ADstico=20 > >> >>> de=20 > >> >>> >> situaci=C3=B3n en perros, gatos y hurones. De estos tres es de= =20 > >> particular=20 > >> >>> >> relevancia mencionar a los hurones dom=C3=A9sticos (*Mustela ou= torius=20 > >> >>> furo*), ya=20 > >> >>> >> que pertenecen a la familia *Mustelidae* y guardan una relaci= =C3=B3n=20 > >> >>> taxon=C3=B3mica=20 > >> >>> >> con los must=C3=A9lidos usados en granjas como lo es el vis=C3= =B3n=20 > americano=20 > >> >>> >> (*Neovison vison*) y vis=C3=B3n europeo (*Mustela lutreola*), e= stos=20 > >> =C3=BAltimos=20 > >> >>> >> responsables del brote de SARS-COV-2 que llev=C3=B3 a la eutana= sia de=20 > 17=20 > >> >>> >> millones de visones.[^2]=20 > >> >>> >> > > >> >>> >> > Aunque los hurones dom=C3=A9sticos frecuentemente se encuentr= an=20 > >> separados=20 > >> >>> de=20 > >> >>> >> otros y no son capaces de mantener la propagaci=C3=B3n del viru= s de=20 > >> manera=20 > >> >>> >> estable @Gortazar2021, el gobierno del Reino Unido ha emitido= =20 > una=20 > >> gu=C3=ADa=20 > >> >>> >> especial para los due=C3=B1os de estos animales debido al riesg= o que=20 > >> pueden=20 > >> >>> >> representar [^3].=20 > >> >>> >> > > >> >>> >> > [^2]: [=C2=BFPor qu=C3=A9 Dinamarca sacrific=C3=B3 17 millone= s de visones?]( > >> >>> >>=20 > >> >>>=20 > >>=20 > https://www.nbcnews.com/news/animal-news/here-s-why-denmark-culled-17-mil= lion-minks-now-plans-n1249610 > >> >>> >> ) > >> >>> >> > > >> >>> >> > [^3]: [Medidas preventivas en lo que respecta al SARS-COV-2 y= =20 > los=20 > >> >>> >> hurones en el Reino Unido]( > >> >>> >>=20 > http://apha.defra.gov.uk/documents/guidance-sars-cov-2-ferrets.pdf) > >> >>> >> > > >> >>> >> > Es as=C3=AD que en consideraci=C3=B3n al C=C3=B3digo Sanitari= o para los=20 > Animales=20 > >> >>> >> Terrestres que contempla al SARS-COV-2 como una enfermedad=20 > >> emergente y=20 > >> >>> la=20 > >> >>> >> falta de datos al respecto de la enfermedad en los animales=20 > >> dom=C3=A9sticos,=20 > >> >>> es=20 > >> >>> >> necesario realizar un diagn=C3=B3stico de situaci=C3=B3n en nue= stra=20 > >> poblaci=C3=B3n.=20 > >> >>> >> > > >> >>> >> > # Referencias > >> >>> >> > --- > >> >>> >> > title: Ejercicio de pruebas diagn=C3=B3sticas complementarias > >> >>> >> > author: Julio Vera de Le=C3=B3n > >> >>> >> > date: 26/Mayo/2021 > >> >>> >> > ---- > >> >>> >> > > >> >>> >> > # Primer prueba > >> >>> >> > > >> >>> >> > La primer prueba tamiz que se usa para brucelosis es la de=20 > anillo=20 > >> en=20 > >> >>> >> leche.=20 > >> >>> >> > > >> >>> >> > Se hizo un diagn=C3=B3stico con la prueba tamiz de anillo en = leche=20 > >> para=20 > >> >>> >> detectar a los hatos positivos a la enfermedad, estos hatos=20 > cuentan=20 > >> con=20 > >> >>> >> 10.000 animales, los cuales fueron evaluados individualmente=20 > para=20 > >> >>> encontrar=20 > >> >>> >> los positivos; a trav=C3=A9s de la prueba tamiz de rosa de beng= ala la=20 > >> cual=20 > >> >>> tiene=20 > >> >>> >> una sensibilidad del 95.2% y una especificidad del 98.5%. > >> >>> >> > > >> >>> >> > | Prueba | Positivos | Negativos | Total | > >> >>> >> > | --------- | --------- | --------- | ----- | > >> >>> >> > | Positivos | 286 | 145 | 431 | > >> >>> >> > | Negativos | 14 | 9555 | 9569 | > >> >>> >> > | Total | 300 | 9700 | 10000 | > >> >>> >> > > >> >>> >> > 1. Sanos: 9555 > >> >>> >> > 2. Enfermos postprueba: 286 > >> >>> >> > 3. Falsos positivos: 145 > >> >>> >> > 4. Falsos negativos: 14 > >> >>> >> > 5. Valor predictivo positivo: 66% > >> >>> >> > 6. Valor predictivo negativo: 99% > >> >>> >> > 7. Positivos a la prueba: 431 animales positivos, incluyendo= =20 > >> falsos=20 > >> >>> >> positivos.=20 > >> >>> >> > > >> >>> >> > Son muchos animales (431) que se van a eliminar incluyendo lo= s=20 > >> 145=20 > >> >>> >> falsos positivos, sacrificando 145 animales que no deber=C3=ADa= n=20 > >> >>> sacrificarse,=20 > >> >>> >> por lo que es necesario despu=C3=A9s de la prueba tamiz realiza= r una=20 > >> prueba=20 > >> >>> >> mucho m=C3=A1s especifica, por lo que se sugierte una prueba co= n mas=20 > >> >>> >> especificidad para bajar la cantidad de falsos positivos.=20 > >> >>> >> > > >> >>> >> > # Segunda prueba > >> >>> >> > > >> >>> >> > La siguiente prueba se hace en paralelo, la norma dice que la= =20 > >> segunda=20 > >> >>> >> prueba es la *prueba de ribanol*. Esta tiene una sensibilidad= =20 > del=20 > >> 96.4%=20 > >> >>> y=20 > >> >>> >> especificidad de 98.7% > >> >>> >> > > >> >>> >> > Cuadro de 2x2:=20 > >> >>> >> > > >> >>> >> > | Prueba | Positivos | Negativos | Total | > >> >>> >> > | --------- | --------- | --------- | ----- | > >> >>> >> > | Positivos | 276 | 2 | 278 | > >> >>> >> > | Negativos | 10 | 143 | 153 | > >> >>> >> > | Total | 286 | 145 | 431 | > >> >>> >> > > >> >>> >> > 1. En que animales se aplicar=C3=ADa? Sobre el total de posit= ivos,=20 > que=20 > >> >>> ser=C3=ADa=20 > >> >>> >> 431 > >> >>> >> > 2. Verdaderos positivos: 276 > >> >>> >> > 3. Verdaderamente sanos: 143 > >> >>> >> > 4. Falsos positivos: 2 > >> >>> >> > 5. Falsos negativos: 10 > >> >>> >> > 6. Valor predicitvo positivo: 99%=20 > >> >>> >> > 7. Valor predictivo negativo: 93% > >> >>> >> > > >> >>> >> > # Tercer prueba > >> >>> >> > > >> >>> >> > Al realizar un tercer diagn=C3=B3stico con la prueba de fijac= i=C3=B3n=20 > del=20 > >> >>> >> complemento (confirmatoria) con una sensibilidad del 97.5% y=20 > >> >>> especificidad=20 > >> >>> >> del 99% > >> >>> >> > > >> >>> >> > Cuadro 2 x2: > >> >>> >> > > >> >>> >> > | Prueba | Positivos | Negativos | Total | > >> >>> >> > | --------- | --------- | --------- | ----- | > >> >>> >> > | Positivos | 269 | 0 | 269 | > >> >>> >> > | Negativos | 7 | 2 | 9 | > >> >>> >> > | Total | 276 | 2 | 278 | > >> >>> >> > > >> >>> >> > 1. Animales falsos positivos que seran eliminados: 0 > >> >>> >> > 2. Animales falsos negativos que quedar=C3=A1n en el hato: 7 > >> >>> >> > 3. Valor predictivo positivo: 100%. Quiere decir que de los= =20 > >> animales=20 > >> >>> a=20 > >> >>> >> los que se les hace la prueba y est=C3=A1n enfermos, el 100% sa= ldr=C3=A1n=20 > con=20 > >> un=20 > >> >>> >> respultado positivo. > >> >>> >> > 4. Valor predictivo negativo: 22%. Quiere decir de los=20 > animales a=20 > >> los=20 > >> >>> >> que se les hace la prueba y est=C3=A1n sanos, solamente el 22% = tiene=20 > >> >>> >> probabilidad de estar realmente sano si sali=C3=B3 negativo.=20 > >> >>> >> >=20 > >> >>> >> > # Despu=C3=A9s de las pruebas > >> >>> >> > > >> >>> >> > Al realizar un diagn=C3=B3stico a los 6 meses de iniciado el= =20 > programa: > >> >>> >> > > >> >>> >> > 1. =C2=BFCu=C3=A1l es la prevalencia real final de la enferme= dad en la=20 > >> cuenca=20 > >> >>> >> lechera? 2.8% (278/10000) > >> >>> >> > 2. La prevalencia real en el 3er cuadro: 99.3%=20 > >> >>> >> > 3. =C2=BFCu=C3=A1l es la prevalencia aparente en el 3er cuadr= o? 2.7% () > >> >>> >> > 4. Repercusiones de dejar a los animales falsos negativos en= =20 > el=20 > >> hato=20 > >> >>> es=20 > >> >>> >> que se quedan 7 animales con brucella, que pueden seguir=20 > >> contagiando y=20 > >> >>> >> prevalece la enfermedad.=20 > >> >>> >> > > >> >>> >> > El costo de la prueba da anillo en leche es absorbido por el= =20 > >> gobierno=20 > >> >>> >> como una ayuda a los productoras y un incentivo para erradicar= =20 > esta=20 > >> >>> >> zoonosis de tos animales. Sin embargo, el costo de las dem=C3= =A1s=20 > >> pruebas es=20 > >> >>> >> erogado por los productores: > >> >>> >> > > >> >>> >> > 1. Costo de diagnosticar a los 10,000 animales con rosa de=20 > >> bengala=20 > >> >>> >> (anillo en leche), si esta prueba cuesta $0.15 por 100 animales= :=20 > 15=20 > >> >>> pesos > >> >>> >> > 2. Costo de diagnosticar $1 por 100: ser=C3=ADan $4.3 > >> >>> >> > 3. Costo de diagnosticar fijaci=C3=B3n por complemento $500 p= or 100=20 > >> >>> animales:=20 > >> >>> >> $1390 > >> >>> >> > 4. Costo de eliminar a los animales positivos y falsos=20 > positivos=20 > >> >>> >> (separadamente), si una vaquilla de reemplazo cuesta $1,000=20 > >> dolares.=20 > >> >>> Costo=20 > >> >>> >> de positivos: $278,000 dolares.=20 > >> >>> >> > 5. Costo total de las 3 pruebas y de los animales a=20 > sacrificar:=20 > >> De=20 > >> >>> las 3=20 > >> >>> >> pruebas son $1409.3 pesos.=20 > >> >>> >> > >> >>> > > >> >>> > --=20 > >> >>> > You received this message because you are subscribed to the=20 > Google=20 > >> >>> Groups "pandoc-discuss" group. > >> >>> > To unsubscribe from this group and stop receiving emails from it= ,=20 > >> send=20 > >> >>> an email to pandoc-discus...-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org > >> >>> > To view this discussion on the web visit=20 > >> >>>=20 > >>=20 > https://groups.google.com/d/msgid/pandoc-discuss/edd6a94c-a735-494d-88c5-= bacabb6842b0n%40googlegroups.com > >> >>> . > >> >>> > >> >> > >> >> --=20 > >> >> You received this message because you are subscribed to the Google= =20 > >> Groups "pandoc-discuss" group. > >> >> To unsubscribe from this group and stop receiving emails from it,= =20 > send=20 > >> an email to pandoc-discus...-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org > >> >> To view this discussion on the web visit=20 > >>=20 > https://groups.google.com/d/msgid/pandoc-discuss/932560f4-7866-4fd4-90e7-= 4797e23fab20n%40googlegroups.com > >> . > >> >> > >> >> Table tests to see if it works > >> >> > >> >> | Perros | Talla | Peso | Nombre | > >> >> | ------ | ----- | ---- | ------ | > >> >> | 23 | 5 | 6 | Chicu | > >> >> | 24 | 2 | 4 | Fala | > >> >> | 45 | 8 | 10 | Frty | > >> >> Table: Perros 1 > >> >> > >> >> Another table > >> >> > >> >> | Perros | Talla | Peso | Nombre | > >> >> | ------ | ----- | ---- | ------ | > >> >> | 23 | 5 | 6 | Chicu | > >> >> | 24 | 2 | 4 | Fala | > >> >> | 45 | 8 | 10 | Frty | > >> >> Table: Perros 2 > >> >> > >> >> And another table > >> >> > >> >> | Perros | Talla | Peso | Nombre | > >> >> | ------ | ----- | ---- | ------ | > >> >> | 23 | 5 | 6 | Chicu | > >> >> | 24 | 2 | 4 | Fala | > >> >> | 45 | 8 | 10 | Frty | > >> >> Table: Perros 3 > >> > > > > --=20 > > You received this message because you are subscribed to the Google=20 > Groups "pandoc-discuss" group. > > To unsubscribe from this group and stop receiving emails from it, send= =20 > an email to pandoc-discus...-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org > > To view this discussion on the web visit=20 > https://groups.google.com/d/msgid/pandoc-discuss/ba007430-af22-455f-a4a8-= 96011afe5dc3n%40googlegroups.com > . > --=20 You received this message because you are subscribed to the Google Groups "= pandoc-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an e= mail to pandoc-discuss+unsubscribe-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org To view this discussion on the web visit https://groups.google.com/d/msgid/= pandoc-discuss/74450a6b-43ad-4780-90d6-80f51c203f1fn%40googlegroups.com. ------=_Part_883_78613668.1622214193703 Content-Type: text/html; charset="UTF-8" Content-Transfer-Encoding: quoted-printable I never created this folder ~/.pandoc or this one ~/.local/share/pandoc. I = made a quick google search and found that I was expected to create those di= rectories, I never found the guidelines in the documentation tho. So answer= ing your question, I don't have a reference.docx because I haven't created = those directories.

thank you

El jueves, 27 de mayo d= e 2021 a las 16:16:27 UTC-5, John MacFarlane escribi=C3=B3:

Do you have a folder ~/.pandoc or ~/.local/share/pandoc that
contains reference.docx?

Julio Vera <avenz...@gmai= l.com> writes:

> Hi! I don't understand what about the "reference.docx&quo= t;, but in my folder=20
> where I have the .md file I only have another .pdf file.=20
>
> The command I use is: pandoc pxdxcomp.md -o pxdxcomp.docx
> El jueves, 27 de mayo de 2021 a las 14:04:36 UTC-5, John MacFarlan= e=20
> escribi=C3=B3:
>
>> Also, please let us know the full command you are using to
>> convert (including any options).
>>
>> John MacFarlane <j...-TVLZxgkOlNX2fBVCVOL8/A@public.gmane.org> writes:
>>
>> > Make sure you don't have a reference.docx in your use= r data
>> > directory.
>> >
>> > Julio Vera <avenz...-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org> writes:
>> >
>> >> The latest one available in pandoc.o= rg, I ran the script to uninstall=20
>> it=20
>> >> and then downloaded it again for macOS.=20
>> >>
>> >> I tested again with this file (prueba.md) that I crea= ted just to see if=20
>> it=20
>> >> woks with new files but I got the same result.
>> >>
>> >> [image: Captura de Pantalla 2021-05-27 a la(s) 12.54.= 14.png]
>> >> However, when I convert the dxprevcovid19.md to .docx= the table there=20
>> >> renders fine.=20
>> >>
>> >> El jueves, 27 de mayo de 2021 a las 12:49:09 UTC-5, J= ohn MacFarlane=20
>> >> escribi=C3=B3:
>> >>
>> >>>
>> >>> That's very strange -- it looks like it is us= ing extremely narrow
>> >>> columns. But I can't reproduce this with late= st pandoc. It
>> >>> looks fine. What version are you using?
>> >>>
>> >>> Julio Vera <avenz...-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org> writes:
>> >>>
>> >>> > [image: Captura de Pantalla 2021-05-27 a la(= s) 12.27.20.png]
>> >>> >
>> >>> > Corrected it, but the tables are still not r= endering. That's how I=20
>> see=20
>> >>> the=20
>> >>> > tables inside the docx just for that file (p= xdxcomp.md), when I=20
>> convert=20
>> >>> it=20
>> >>> > to pdf they render fine.=20
>> >>> >
>> >>> > El jueves, 27 de mayo de 2021 a las 12:17:28= UTC-5, John MacFarlane=20
>> >>> > escribi=C3=B3:
>> >>> >
>> >>> >>
>> >>> >> Looks like you've got four ---- inst= ead of three --- under the
>> >>> >> YAML metadata block.
>> >>> >>
>> >>> >>
>> >>> >> Julio Vera <avenz...-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org> writes:
>> >>> >>
>> >>> >> > Hi!=20
>> >>> >> >
>> >>> >> > I attached 2 files. The one that I = can't convert correctly is=20
>> >>> >> pxdxcomp.md,=20
>> >>> >> > the other one (dxprevcovid) I tried= to convert it and had no=20
>> issue.=20
>> >>> The=20
>> >>> >> > language of my work is in Spanish, = I hope it isn't an issue here.=20
>> I=20
>> >>> >> tried=20
>> >>> >> > copying everything and pasting it i= nside a new file but still=20
>> have=20
>> >>> the=20
>> >>> >> same=20
>> >>> >> > problem, also I uninstalled and ins= talled pandoc.
>> >>> >> >
>> >>> >> > El jueves, 27 de mayo de 2021 a las= 12:00:09 UTC-5, John=20
>> MacFarlane=20
>> >>> >> > escribi=C3=B3:
>> >>> >> >
>> >>> >> >>
>> >>> >> >> Not much we can do to help with= out seeing the input markdown=20
>> file...
>> >>> >> >>
>> >>> >> >> Julio Vera <avenz...-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org> writes:
>> >>> >> >>
>> >>> >> >> > I usually just ran the fol= lowing command:
>> >>> >> >> >
>> >>> >> >> > pandoc nameofile.md --cite= proc -o nameofile.docx
>> >>> >> >> >
>> >>> >> >> > But today I was working wi= th a particular .md file and after I=20
>> >>> >> finished=20
>> >>> >> >> > with it I tried to convert= it, but the title, date and author=20
>> >>> >> parameters=20
>> >>> >> >> > that go inside the YAML bl= ock aren't converted, they display=20
>> like=20
>> >>> >> this:
>> >>> >> >> >
>> >>> >> >> > title: title of the docume= nt
>> >>> >> >> > author: myname
>> >>> >> >> > date: today
>> >>> >> >> >
>> >>> >> >> > But just in that format, n= ot like it used to do. And also the=20
>> >>> tables=20
>> >>> >> >> aren't=20
>> >>> >> >> > formatted, they and up in = the docs like this:
>> >>> >> >> >
>> >>> >> >> > p t
>> >>> >> >> > r 2
>> >>> >> >> > 1 2
>> >>> >> >> > 2 2
>> >>> >> >> >
>> >>> >> >> > Just to say an example. I = don't know hat happened.
>> >>> >> >> >
>> >>> >> >> > --=20
>> >>> >> >> > You received this message = because you are subscribed to the=20
>> Google=20
>> >>> >> >> Groups "pandoc-discuss&quo= t; group.
>> >>> >> >> > To unsubscribe from this g= roup and stop receiving emails from=20
>> it,=20
>> >>> >> send=20
>> >>> >> >> an email to pandoc-discus...-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org.
>> >>> >> >> > To view this discussion on= the web visit=20
>> >>> >> >>=20
>> >>> >>=20
>> >>>=20
>> https://groups.go= ogle.com/d/msgid/pandoc-discuss/1abeeca5-7362-441d-907a-08df53958b28n%40goo= glegroups.com
>> >>> >> >> .
>> >>> >> >>
>> >>> >> >
>> >>> >> > --=20
>> >>> >> > You received this message because y= ou are subscribed to the=20
>> Google=20
>> >>> >> Groups "pandoc-discuss" group.
>> >>> >> > To unsubscribe from this group and = stop receiving emails from it,=20
>> >>> send=20
>> >>> >> an email to pandoc-discus...-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org.
>> >>> >> > To view this discussion on the web = visit=20
>> >>> >>=20
>> >>>=20
>> https://groups.go= ogle.com/d/msgid/pandoc-discuss/eaeda4d3-c7f4-430f-b569-e2fee781b831n%40goo= glegroups.com
>> >>> >> .
>> >>> >> > ---
>> >>> >> > title: Diagn=C3=B3stico situacional= sobre la prevalencia de SARS-COV-2=20
>> en=20
>> >>> >> perros, gatos y hurones de propietarios = previamente diagn=C3=B3sticados=20
>> con=20
>> >>> el=20
>> >>> >> virus.
>> >>> >> > author: Julio Vera de Le=C3=B3n
>> >>> >> > date: 25/Mayo/2021
>> >>> >> > bibliography: proyecto.bib
>> >>> >> > csl: vca.csl
>> >>> >> > ---
>> >>> >> >
>> >>> >> > # T=C3=ADtulo
>> >>> >> > **H. CONSEJO T=C3=89CNICO DE LA FAC= ULTAD**
>> >>> >> > **DE MEDICINA VETERINARIA Y ZOOTECN= IA**
>> >>> >> >
>> >>> >> > **Presente**
>> >>> >> >
>> >>> >> > =C3=89l que suscribe, **Julio Vera = de Le=C3=B3n**, alumnos de la Maestr=C3=ADa=20
>> en=20
>> >>> >> Medicina Veterinaria y Zootecnia en el = =C3=A1rea de Salud P=C3=BAblica y=20
>> Medicina=20
>> >>> >> Preventiva, con n=C3=BAmero de cuenta 52= 101425-4. Pone a su=20
>> consideraci=C3=B3n el=20
>> >>> >> siguiente tema para diagn=C3=B3stico de = situaci=C3=B3n:
>> >>> >> >
>> >>> >> > **Diagn=C3=B3stico situacional sobr= e la prevalencia de SARS-COV-2 en=20
>> >>> perros,=20
>> >>> >> gatos y hurones de propietarios previame= nte diagn=C3=B3sticados con el=20
>> >>> virus.**
>> >>> >> >
>> >>> >> > Que ser=C3=A1 realizado en el **Dep= artamento de Medicina Preventiva y=20
>> >>> Salud=20
>> >>> >> P=C3=BAblica de la Facultad de Medicina = Veterinaria y Zootecnia de la=20
>> UNAM**=20
>> >>> y=20
>> >>> >> que pertenece al campo de profundizaci= =C3=B3n profesional: **Medicina=20
>> >>> Preventiva=20
>> >>> >> y Salud P=C3=BAblica**. Bajo la asesor= =C3=ADa del comit=C3=A9 tutor conformado por=20
>> el=20
>> >>> >> **Dr. MSP Juan Ram=C3=B3n Ayala Torres**= , la **MCV. Patricia Mora=20
>> Medina** y=20
>> >>> el=20
>> >>> >> **MCV. Jorge Francisco Monroy L=C3=B3pez= **
>> >>> >> >
>> >>> >> > # Introducci=C3=B3n
>> >>> >> >
>> >>> >> > El sustento de este diagn=C3=B3stic= o de situaci=C3=B3n viene de que a la=20
>> fecha=20
>> >>> es=20
>> >>> >> desconocido por el autor alg=C3=BAn mate= rial bibliogr=C3=A1fico o de consulta=20
>> en=20
>> >>> el=20
>> >>> >> que se tengan datos referentes al n=C3= =BAmero de animales que han sido=20
>> >>> >> infectados por el s=C3=ADndrome respirat= orio agudo severo coronavirus 2=20
>> >>> >> (SARS-COV-2). Esto a pesar de que la inf= ecci=C3=B3n en los animales por=20
>> >>> >> SARS-COV-2 cumple los criterios de la OI= E como enfermedad=20
>> emergente.[^1]
>> >>> >> >
>> >>> >> > Es relevante tener datos que nos pe= rmitan conocer la prevalencia=20
>> del=20
>> >>> >> agente en los animales de compa=C3=B1=C3= =ADa con los que mantenemos una=20
>> relaci=C3=B3n=20
>> >>> m=C3=A1s=20
>> >>> >> cercana.
>> >>> >> >
>> >>> >> > [^1]: Enfermedad emergente por la O= IE: La aparici=C3=B3n de una=20
>> >>> enfermedad,=20
>> >>> >> infecci=C3=B3n o infestaci=C3=B3n nueva = y que impacta en la sanidad animal o=20
>> la=20
>> >>> salud=20
>> >>> >> humana.
>> >>> >> >
>> >>> >> > A la fecha existen al menos 4 disti= ntas instituciones en Am=C3=A9rica=20
>> que=20
>> >>> >> est=C3=A1n realizando estudios de muestr= eo para conocer la cantidad de=20
>> >>> animales=20
>> >>> >> de compa=C3=B1ia infectados por contacto= con sus propietarios, las=20
>> cuales=20
>> >>> son:
>> >>> >> >
>> >>> >> > 1. [Ontario Veterinary College, Uni= versity of Guelph](
>> >>> >> https://o= vc.uoguelph.ca)
>> >>> >> > 2. [Cummings School of Veterinary M= edicine at Tufts University](
>> >>> >> https://sites.tufts.edu/covers/)
>> >>> >> > 3. [Texas A&M University, Colle= ge of Veterinary Medicine &=20
>> Biomedical=20
>> >>> >> Sciences](https://= vetmed.tamu.edu/hamer-lab/covid-19-pets-research/
>> )
>> >>> >> > 4. [University of Washington Center= for One Health Research](
>> >>> >> https://= deohs.washington.edu/cohr/covid-19-and-pets-study-caps)
>> >>> >> >
>> >>> >> > La evidencia apunta a que la epidem= ia provocada por SARS-COV-2 se=20
>> >>> >> mantiene principalmente por la transmisi= =C3=B3n de humanos hacia otros=20
>> >>> humanos,=20
>> >>> >> por lo que en este estudio el enfoque se= r=C3=A1 conocer la cantidad de=20
>> >>> animales=20
>> >>> >> que han sido infectados por sus propieta= rios, factores que=20
>> >>> contribuyeron a=20
>> >>> >> la infecci=C3=B3n, y conocer los tipos d= e casa en los que hubo m=C3=A1s=20
>> riesgo de=20
>> >>> >> infecci=C3=B3n a las mascotas. Aunado a = lo anterior, la OIE no descarta=20
>> a=20
>> >>> los=20
>> >>> >> animales salvajes y dom=C3=A9sticos como= reservorios futuros de la=20
>> >>> enfermedad y=20
>> >>> >> que puedan representar un problema para = la salud p=C3=BAblica, por lo=20
>> que=20
>> >>> >> sugiere el monitoreo cercano de las espe= cies con las que m=C3=A1s=20
>> >>> convivimos. De=20
>> >>> >> igual forma, la introducci=C3=B3n consta= nte del virus a nuevas=20
>> poblaciones=20
>> >>> >> animales puede llevar a mutaciones que p= uedan afectar la sanidad=20
>> animal=20
>> >>> o=20
>> >>> >> salud humana.
>> >>> >> >
>> >>> >> > A la fecha la OIE cuenta con inform= aci=C3=B3n referente a las especies=20
>> de=20
>> >>> >> inter=C3=A9s en este diagn=C3=B3stico en= cu=C3=A1nto a la susceptibilidad que=20
>> tienen=20
>> >>> al=20
>> >>> >> virus, se pone en la siguiente tabla:[@O= IE2021]
>> >>> >> >
>> >>> >> > | Especie | Tipo de infecci=C3=B3n = | Susceptibilidad a la infecci=C3=B3n |=20
>> >>> Signos=20
>> >>> >> cl=C3=ADnicos | Transmisi=C3=B3n |
>> >>> >> > | ------------------ | ------------= ---------- |=20
>> >>> >> ------------------------------ | -------= ------------------- |=20
>> >>> >> ----------------- |
>> >>> >> > | Hurones | Natural y experimental = | Alta | S=C3=AD (s=C3=B3lo en algunos=20
>> >>> casos) |=20
>> >>> >> S=C3=AD, entre hurones |
>> >>> >> > | Gatos (dom=C3=A9sticos) | Natural= y experimental | Alta | S=C3=AD (s=C3=B3lo=20
>> en=20
>> >>> >> algunos casos) | S=C3=AD, entre gatos |
>> >>> >> > | Perros | Natural y experimental |= Baja | S=C3=AD (s=C3=B3lo en algunos=20
>> casos)=20
>> >>> |=20
>> >>> >> No |
>> >>> >> > Table: SARS-COV-2 en Hurones, perro= s y gatos (adaptado de la OIE)
>> >>> >> >
>> >>> >> > A pesar de que la informaci=C3=B3n = actual ha mencionado que la=20
>> epidemia se=20
>> >>> >> mantiene por medio de la transmisi=C3=B3= n humano-humano, no se puede=20
>> >>> descartar=20
>> >>> >> como un componente de esta cadena de tra= nsmisi=C3=B3n a los animales de=20
>> >>> >> compa=C3=B1ia, aunque su papel de moment= o sea mucho menos relevante. De=20
>> ah=C3=AD=20
>> >>> que=20
>> >>> >> una de las indicaciones que contempla la= CDC sea la de mantener a=20
>> los=20
>> >>> >> animales separados junto con su propieta= rio y reconoce el riesgo de=20
>> >>> >> transmisi=C3=B3n desde la mascota es baj= o. [@CDC2021]
>> >>> >> >
>> >>> >> > # Justificaci=C3=B3n
>> >>> >> >
>> >>> >> > La detecci=C3=B3n del material gen= =C3=A9tico del virus de SARS-COV-2 en=20
>> perros=20
>> >>> y=20
>> >>> >> gatos se ha demostrado en animales con y= sin signolog=C3=ADa, as=C3=AD como=20
>> >>> tambi=C3=A9n=20
>> >>> >> en el suero de mascotas que se han muest= reado en zonas afectadas,=20
>> por=20
>> >>> lo=20
>> >>> >> que la infecci=C3=B3n en estas especies = est=C3=A1 comprobada, y m=C3=A1s=20
>> importante se=20
>> >>> ha=20
>> >>> >> comprobado que llegan a diseminar materi= al viral con una cantidad=20
>> >>> necesaria=20
>> >>> >> que ha demostrado ser capaz de infectar = a otros animales con los=20
>> que=20
>> >>> >> conviven. @Patterson2020
>> >>> >> >
>> >>> >> > En contraste con lo mencionado ante= riormente, las especies de=20
>> >>> producci=C3=B3n=20
>> >>> >> como cerdos (*Sus scropha*) y aves (gall= inas, patos y pavos) han=20
>> >>> demostrado=20
>> >>> >> de nula a extremadamente baja susceptibl= idad de infecci=C3=B3n de manera=20
>> >>> >> experimental, adem=C3=A1s de que no se h= a comprobado sean capaces de=20
>> >>> transmitir=20
>> >>> >> la enfermedad. @Shi2020 De manera simila= r los bovinos (*Bos=20
>> taurus*)=20
>> >>> que se=20
>> >>> >> han inoculado experimentalmente con el a= gente viral han demostrado=20
>> una=20
>> >>> >> susceptibilidad baja al agente y nula ca= pacidad de transmisi=C3=B3n del=20
>> >>> mismo.=20
>> >>> >> @Ulrich2020=20
>> >>> >> >
>> >>> >> > Debido a que las especies usadas co= m=C3=BAnmente en la ganader=C3=ADa no=20
>> han=20
>> >>> >> demostrado ser suceptibles al virus, se = decide enfocar el=20
>> diagn=C3=ADstico=20
>> >>> de=20
>> >>> >> situaci=C3=B3n en perros, gatos y hurone= s. De estos tres es de=20
>> particular=20
>> >>> >> relevancia mencionar a los hurones dom= =C3=A9sticos (*Mustela outorius=20
>> >>> furo*), ya=20
>> >>> >> que pertenecen a la familia *Mustelidae*= y guardan una relaci=C3=B3n=20
>> >>> taxon=C3=B3mica=20
>> >>> >> con los must=C3=A9lidos usados en granja= s como lo es el vis=C3=B3n americano=20
>> >>> >> (*Neovison vison*) y vis=C3=B3n europeo = (*Mustela lutreola*), estos=20
>> =C3=BAltimos=20
>> >>> >> responsables del brote de SARS-COV-2 que= llev=C3=B3 a la eutanasia de 17=20
>> >>> >> millones de visones.[^2]=20
>> >>> >> >
>> >>> >> > Aunque los hurones dom=C3=A9sticos = frecuentemente se encuentran=20
>> separados=20
>> >>> de=20
>> >>> >> otros y no son capaces de mantener la pr= opagaci=C3=B3n del virus de=20
>> manera=20
>> >>> >> estable @Gortazar2021, el gobierno del R= eino Unido ha emitido una=20
>> gu=C3=ADa=20
>> >>> >> especial para los due=C3=B1os de estos a= nimales debido al riesgo que=20
>> pueden=20
>> >>> >> representar [^3].=20
>> >>> >> >
>> >>> >> > [^2]: [=C2=BFPor qu=C3=A9 Dinamarca= sacrific=C3=B3 17 millones de visones?](
>> >>> >>=20
>> >>>=20
>> https://www.nbcnews.com/= news/animal-news/here-s-why-denmark-culled-17-million-minks-now-plans-n1249= 610
>> >>> >> )
>> >>> >> >
>> >>> >> > [^3]: [Medidas preventivas en lo qu= e respecta al SARS-COV-2 y los=20
>> >>> >> hurones en el Reino Unido](
>> >>> >> = http://apha.defra.gov.uk/documents/guidance-sars-cov-2-ferrets.pdf)
>> >>> >> >
>> >>> >> > Es as=C3=AD que en consideraci=C3= =B3n al C=C3=B3digo Sanitario para los Animales=20
>> >>> >> Terrestres que contempla al SARS-COV-2 c= omo una enfermedad=20
>> emergente y=20
>> >>> la=20
>> >>> >> falta de datos al respecto de la enferme= dad en los animales=20
>> dom=C3=A9sticos,=20
>> >>> es=20
>> >>> >> necesario realizar un diagn=C3=B3stico d= e situaci=C3=B3n en nuestra=20
>> poblaci=C3=B3n.=20
>> >>> >> >
>> >>> >> > # Referencias
>> >>> >> > ---
>> >>> >> > title: Ejercicio de pruebas diagn= =C3=B3sticas complementarias
>> >>> >> > author: Julio Vera de Le=C3=B3n
>> >>> >> > date: 26/Mayo/2021
>> >>> >> > ----
>> >>> >> >
>> >>> >> > # Primer prueba
>> >>> >> >
>> >>> >> > La primer prueba tamiz que se usa p= ara brucelosis es la de anillo=20
>> en=20
>> >>> >> leche.=20
>> >>> >> >
>> >>> >> > Se hizo un diagn=C3=B3stico con la = prueba tamiz de anillo en leche=20
>> para=20
>> >>> >> detectar a los hatos positivos a la enfe= rmedad, estos hatos cuentan=20
>> con=20
>> >>> >> 10.000 animales, los cuales fueron evalu= ados individualmente para=20
>> >>> encontrar=20
>> >>> >> los positivos; a trav=C3=A9s de la prueb= a tamiz de rosa de bengala la=20
>> cual=20
>> >>> tiene=20
>> >>> >> una sensibilidad del 95.2% y una especif= icidad del 98.5%.
>> >>> >> >
>> >>> >> > | Prueba | Positivos | Negativos | = Total |
>> >>> >> > | --------- | --------- | ---------= | ----- |
>> >>> >> > | Positivos | 286 | 145 | 431 |
>> >>> >> > | Negativos | 14 | 9555 | 9569 |
>> >>> >> > | Total | 300 | 9700 | 10000 |
>> >>> >> >
>> >>> >> > 1. Sanos: 9555
>> >>> >> > 2. Enfermos postprueba: 286
>> >>> >> > 3. Falsos positivos: 145
>> >>> >> > 4. Falsos negativos: 14
>> >>> >> > 5. Valor predictivo positivo: 66%
>> >>> >> > 6. Valor predictivo negativo: 99%
>> >>> >> > 7. Positivos a la prueba: 431 anima= les positivos, incluyendo=20
>> falsos=20
>> >>> >> positivos.=20
>> >>> >> >
>> >>> >> > Son muchos animales (431) que se va= n a eliminar incluyendo los=20
>> 145=20
>> >>> >> falsos positivos, sacrificando 145 anima= les que no deber=C3=ADan=20
>> >>> sacrificarse,=20
>> >>> >> por lo que es necesario despu=C3=A9s de = la prueba tamiz realizar una=20
>> prueba=20
>> >>> >> mucho m=C3=A1s especifica, por lo que se= sugierte una prueba con mas=20
>> >>> >> especificidad para bajar la cantidad de = falsos positivos.=20
>> >>> >> >
>> >>> >> > # Segunda prueba
>> >>> >> >
>> >>> >> > La siguiente prueba se hace en para= lelo, la norma dice que la=20
>> segunda=20
>> >>> >> prueba es la *prueba de ribanol*. Esta t= iene una sensibilidad del=20
>> 96.4%=20
>> >>> y=20
>> >>> >> especificidad de 98.7%
>> >>> >> >
>> >>> >> > Cuadro de 2x2:=20
>> >>> >> >
>> >>> >> > | Prueba | Positivos | Negativos | = Total |
>> >>> >> > | --------- | --------- | ---------= | ----- |
>> >>> >> > | Positivos | 276 | 2 | 278 |
>> >>> >> > | Negativos | 10 | 143 | 153 |
>> >>> >> > | Total | 286 | 145 | 431 |
>> >>> >> >
>> >>> >> > 1. En que animales se aplicar=C3=AD= a? Sobre el total de positivos, que=20
>> >>> ser=C3=ADa=20
>> >>> >> 431
>> >>> >> > 2. Verdaderos positivos: 276
>> >>> >> > 3. Verdaderamente sanos: 143
>> >>> >> > 4. Falsos positivos: 2
>> >>> >> > 5. Falsos negativos: 10
>> >>> >> > 6. Valor predicitvo positivo: 99%= =20
>> >>> >> > 7. Valor predictivo negativo: 93%
>> >>> >> >
>> >>> >> > # Tercer prueba
>> >>> >> >
>> >>> >> > Al realizar un tercer diagn=C3=B3st= ico con la prueba de fijaci=C3=B3n del=20
>> >>> >> complemento (confirmatoria) con una sens= ibilidad del 97.5% y=20
>> >>> especificidad=20
>> >>> >> del 99%
>> >>> >> >
>> >>> >> > Cuadro 2 x2:
>> >>> >> >
>> >>> >> > | Prueba | Positivos | Negativos | = Total |
>> >>> >> > | --------- | --------- | ---------= | ----- |
>> >>> >> > | Positivos | 269 | 0 | 269 |
>> >>> >> > | Negativos | 7 | 2 | 9 |
>> >>> >> > | Total | 276 | 2 | 278 |
>> >>> >> >
>> >>> >> > 1. Animales falsos positivos que se= ran eliminados: 0
>> >>> >> > 2. Animales falsos negativos que qu= edar=C3=A1n en el hato: 7
>> >>> >> > 3. Valor predictivo positivo: 100%.= Quiere decir que de los=20
>> animales=20
>> >>> a=20
>> >>> >> los que se les hace la prueba y est=C3= =A1n enfermos, el 100% saldr=C3=A1n con=20
>> un=20
>> >>> >> respultado positivo.
>> >>> >> > 4. Valor predictivo negativo: 22%. = Quiere decir de los animales a=20
>> los=20
>> >>> >> que se les hace la prueba y est=C3=A1n s= anos, solamente el 22% tiene=20
>> >>> >> probabilidad de estar realmente sano si = sali=C3=B3 negativo.=20
>> >>> >> >=20
>> >>> >> > # Despu=C3=A9s de las pruebas
>> >>> >> >
>> >>> >> > Al realizar un diagn=C3=B3stico a l= os 6 meses de iniciado el programa:
>> >>> >> >
>> >>> >> > 1. =C2=BFCu=C3=A1l es la prevalenci= a real final de la enfermedad en la=20
>> cuenca=20
>> >>> >> lechera? 2.8% (278/10000)
>> >>> >> > 2. La prevalencia real en el 3er cu= adro: 99.3%=20
>> >>> >> > 3. =C2=BFCu=C3=A1l es la prevalenci= a aparente en el 3er cuadro? 2.7% ()
>> >>> >> > 4. Repercusiones de dejar a los ani= males falsos negativos en el=20
>> hato=20
>> >>> es=20
>> >>> >> que se quedan 7 animales con brucella, q= ue pueden seguir=20
>> contagiando y=20
>> >>> >> prevalece la enfermedad.=20
>> >>> >> >
>> >>> >> > El costo de la prueba da anillo en = leche es absorbido por el=20
>> gobierno=20
>> >>> >> como una ayuda a los productoras y un in= centivo para erradicar esta=20
>> >>> >> zoonosis de tos animales. Sin embargo, e= l costo de las dem=C3=A1s=20
>> pruebas es=20
>> >>> >> erogado por los productores:
>> >>> >> >
>> >>> >> > 1. Costo de diagnosticar a los 10,0= 00 animales con rosa de=20
>> bengala=20
>> >>> >> (anillo en leche), si esta prueba cuesta= $0.15 por 100 animales: 15=20
>> >>> pesos
>> >>> >> > 2. Costo de diagnosticar $1 por 100= : ser=C3=ADan $4.3
>> >>> >> > 3. Costo de diagnosticar fijaci=C3= =B3n por complemento $500 por 100=20
>> >>> animales:=20
>> >>> >> $1390
>> >>> >> > 4. Costo de eliminar a los animales= positivos y falsos positivos=20
>> >>> >> (separadamente), si una vaquilla de reem= plazo cuesta $1,000=20
>> dolares.=20
>> >>> Costo=20
>> >>> >> de positivos: $278,000 dolares.=20
>> >>> >> > 5. Costo total de las 3 pruebas y d= e los animales a sacrificar:=20
>> De=20
>> >>> las 3=20
>> >>> >> pruebas son $1409.3 pesos.=20
>> >>> >>
>> >>> >
>> >>> > --=20
>> >>> > You received this message because you are su= bscribed to the Google=20
>> >>> Groups "pandoc-discuss" group.
>> >>> > To unsubscribe from this group and stop rece= iving emails from it,=20
>> send=20
>> >>> an email to pandoc-discus...-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org.
>> >>> > To view this discussion on the web visit=20
>> >>>=20
>> https://groups.go= ogle.com/d/msgid/pandoc-discuss/edd6a94c-a735-494d-88c5-bacabb6842b0n%40goo= glegroups.com
>> >>> .
>> >>>
>> >>
>> >> --=20
>> >> You received this message because you are subscribed = to the Google=20
>> Groups "pandoc-discuss" group.
>> >> To unsubscribe from this group and stop receiving ema= ils from it, send=20
>> an email to pandoc-= discus...-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org.
>> >> To view this discussion on the web visit=20
>> https://groups.go= ogle.com/d/msgid/pandoc-discuss/932560f4-7866-4fd4-90e7-4797e23fab20n%40goo= glegroups.com
>> .
>> >>
>> >> Table tests to see if it works
>> >>
>> >> | Perros | Talla | Peso | Nombre |
>> >> | ------ | ----- | ---- | ------ |
>> >> | 23 | 5 | 6 | Chicu |
>> >> | 24 | 2 | 4 | Fala |
>> >> | 45 | 8 | 10 | Frty |
>> >> Table: Perros 1
>> >>
>> >> Another table
>> >>
>> >> | Perros | Talla | Peso | Nombre |
>> >> | ------ | ----- | ---- | ------ |
>> >> | 23 | 5 | 6 | Chicu |
>> >> | 24 | 2 | 4 | Fala |
>> >> | 45 | 8 | 10 | Frty |
>> >> Table: Perros 2
>> >>
>> >> And another table
>> >>
>> >> | Perros | Talla | Peso | Nombre |
>> >> | ------ | ----- | ---- | ------ |
>> >> | 23 | 5 | 6 | Chicu |
>> >> | 24 | 2 | 4 | Fala |
>> >> | 45 | 8 | 10 | Frty |
>> >> Table: Perros 3
>>
>
> --=20
> You received this message because you are subscribed to the Google= Groups "pandoc-discuss" group.
> To unsubscribe from this group and stop receiving emails from it, = send an email to pandoc-discus..= .@googlegroups.com.
> To view this discussion on the web visit https://groups.google.com/d/msgid/pandoc-discuss/ba00= 7430-af22-455f-a4a8-96011afe5dc3n%40googlegroups.com.

--
You received this message because you are subscribed to the Google Groups &= quot;pandoc-discuss" group.
To unsubscribe from this group and stop receiving emails from it, send an e= mail to pand= oc-discuss+unsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org.
To view this discussion on the web visit https://groups.google.com/d= /msgid/pandoc-discuss/74450a6b-43ad-4780-90d6-80f51c203f1fn%40googlegroups.= com.
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