Academic Latex PDF Export

Academic Latex PDF Export

[William Horne]

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Any quick tips for how to render a document through pandoc so that it looks 
like this <http://johnmacfarlane.net/epistmod-2003.pdf>? Markdown --> latex 
--> template? If so, can anyone steer me towards documentation that covers 
how best to begin custom template making? If not, any words of advice?

Much appreciated as I finish up my essays for application to graduate 
school.


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Re: Academic Latex PDF Export

[Matthew Pickering]

The default template is obtained with the -D command then you modify
it however you like and pass it using the --template option.

For example..

# Get the template
pandoc -D tex > template.tex
# Edit the template
vim template.tex
# Use the template
pandoc my-awesome-file.tex -o output.pdf --template=template.tex

Does that help?

Matt

On Tue, Jan 3, 2017 at 2:40 AM, William Horne <will.m.horne-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org> wrote:
> Any quick tips for how to render a document through pandoc so that it looks
> like this? Markdown --> latex --> template? If so, can anyone steer me
> towards documentation that covers how best to begin custom template making?
> If not, any words of advice?
>
> Much appreciated as I finish up my essays for application to graduate
> school.
>
>
> --
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Re: Academic Latex PDF Export

[William Horne]

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e.g. double spacing, unique font, indentation at the beginning of 
paragraphs (though I won't want that for the first)

On Monday, January 2, 2017 at 7:40:39 PM UTC-7, William Horne wrote:
>
> Any quick tips for how to render a document through pandoc so that it 
> looks like this <http://johnmacfarlane.net/epistmod-2003.pdf>? Markdown 
> --> latex --> template? If so, can anyone steer me towards documentation 
> that covers how best to begin custom template making? If not, any words of 
> advice?
>
> Much appreciated as I finish up my essays for application to graduate 
> school.
>
>
>

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Re: Academic Latex PDF Export

[William Horne]

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Thank you. I guess I ought to look towards Latex forums to determine how to 
tweak the individual features I listed. Do you, or does anyone, know how to 
point pandoc towards ~/.pandoc for templates? Because while I cloned JGM's 
github repo and placed it there, I receive this message:

pandoc: Could not find data file 
/usr/share/pandoc/data/templates/default.tex

On Monday, January 2, 2017 at 7:40:39 PM UTC-7, William Horne wrote:
>
> Any quick tips for how to render a document through pandoc so that it 
> looks like this <http://johnmacfarlane.net/epistmod-2003.pdf>? Markdown 
> --> latex --> template? If so, can anyone steer me towards documentation 
> that covers how best to begin custom template making? If not, any words of 
> advice?
>
> Much appreciated as I finish up my essays for application to graduate 
> school.
>
>
>

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Re: Academic Latex PDF Export

[William Horne]

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Disregard: walking through this <https://gist.github.com/michaelt/1017790> proves 
helpful.

On Monday, January 2, 2017 at 7:40:39 PM UTC-7, William Horne wrote:
>
> Any quick tips for how to render a document through pandoc so that it 
> looks like this <http://johnmacfarlane.net/epistmod-2003.pdf>? Markdown 
> --> latex --> template? If so, can anyone steer me towards documentation 
> that covers how best to begin custom template making? If not, any words of 
> advice?
>
> Much appreciated as I finish up my essays for application to graduate 
> school.
>
>
>

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Re: Academic Latex PDF Export

[Luis Fernado Silva Castro de Araújo]

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I don't think you need a custom template for that output.... It can easily 
be obtained with changes to header-includes. Please refer to my blog posts 
on the use of pandoc in science here: https://lf-araujo.github.io/

You would probably be interested in the yaml header I released for 
scientific reports here (end of the post):

https://lf-araujo.github.io/posts/going



Best,

lf

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Re: Academic Latex PDF Export

[Scot Mcphee]

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Hi William

I am using Pandoc to write my PhD thesis. I have customised versions of the default templates, and a build system based on shell scripts. The chapter files are in GitHub (a private repository). There are two parts to the build system, a script that just compiles each individual chapter to a PDF, and another one that gets all the chapters and builds one big LaTeχ file, then uses xelatex to build that into a PDF, including all the University-mandated front matter on the thesis file.

The first process is underwritten with a shell script I wrote for myself, pandocPDF, which runs pandoc as per this command line:

/usr/local/bin/pandoc -f markdown -t latex -V geometry:margin=4cm -V fontsize=12pt -V papersize=a4paper -V documentclass=memoir -V classoption=oneside -V classoption=article -V mainfont='Times New Roman' -V frenchspacing -V onehalfspacing -V biblio-title='Works Cited' --smart --standalone --latex-engine=xelatex --bibliography=${dropbox}/ANCH/PHD/THESIS/99-Bibliography/library_clean.bib --csl=${dropbox}/Libraries/pandoc/classics-standard-for-uq-rhd-theses.csl --output=${outfile}.PDF ${1}

I simply symlinked my ~/.pandoc directory to the directory ${dropbox}/Libraries/pandoc and this directory contains altered versions of the latex template which is used above (as well as the CSL file for the Bibliography format, as seen above).

When it does the full latex compile, it does it a bit differently. I’ve organised all my markdown files such that each chapter is in a directory with two numbers, e.g. 00-frontmatter, 01-chapter1, 02-chapter2 and so on. Each file in each directory then is also prefixed with a  two-digit number that indicates it’s order in the chapter. I first collate all these into one giant pandoc/markdown file ("pandoc -f markdown -t markdown <filelist>"), then I convert that one file into a TeX file which I compile to a PDF with xelatex.

One thing I have found is that the CSL format is better at producing certain types of citations/bibliography than the formats available in “pure” biblatex format. I would love pandoc to be able to produce a latex file that contains the already formatted citations and bibliography (according to the CSL style specified).

Scot

--
Scot Mcphee
Computer Programmer, Classics PhD.
p +61 412 957414
e scot.mcphee-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org
w http://autonomous.org/
t @scotartt

> On 03 Jan 2017, at 12:40 , William Horne <will.m.horne-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org> wrote:
> 
> Any quick tips for how to render a document through pandoc so that it looks like this <http://johnmacfarlane.net/epistmod-2003.pdf>? Markdown --> latex --> template? If so, can anyone steer me towards documentation that covers how best to begin custom template making? If not, any words of advice?
> 
> Much appreciated as I finish up my essays for application to graduate school.
> 
> 
> 
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Re: Academic Latex PDF Export

[John MacFarlane]

+++ Scot Mcphee [Jan 03 17 14:35 ]:
>   One thing I have found is that the CSL format is better at producing
>   certain types of citations/bibliography than the formats available in
>   “pure” biblatex format. I would love pandoc to be able to produce a
>   latex file that contains the already formatted citations and
>   bibliography (according to the CSL style specified).

It can!

pandoc --csl mystyle.csl --bibliography mybib.bib \
  -s -S input.txt -o output.tex



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Re: Academic Latex PDF Export

[Scot Mcphee]

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> On 03 Jan 2017, at 20:12 , John MacFarlane <jgm-TVLZxgkOlNX2fBVCVOL8/A@public.gmane.org> wrote:
> 
> +++ Scot Mcphee [Jan 03 17 14:35 ]:
>>  One thing I have found is that the CSL format is better at producing
>>  certain types of citations/bibliography than the formats available in
>>  “pure” biblatex format. I would love pandoc to be able to produce a
>>  latex file that contains the already formatted citations and
>>  bibliography (according to the CSL style specified).
> 
> It can!
> 
> pandoc --csl mystyle.csl --bibliography mybib.bib \
> -s -S input.txt -o output.tex

Ah ha! Thanks John, I will put that into action immediately!

It’s the simple omission of the --biblatex switch that does this, yes?

Scot

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Re: Academic Latex PDF Export

[John MacFarlane]

+++ Scot Mcphee [Jan 03 17 21:37 ]:
>   On 03 Jan 2017, at 20:12 , John MacFarlane <[1]jgm-TVLZxgkOlNX2fBVCVOL8/A@public.gmane.org> wrote:
>
>   +++ Scot Mcphee [Jan 03 17 14:35 ]:
>
>      One thing I have found is that the CSL format is better at
>     producing
>      certain types of citations/bibliography than the formats available
>     in
>      “pure” biblatex format. I would love pandoc to be able to produce a
>      latex file that contains the already formatted citations and
>      bibliography (according to the CSL style specified).
>
>   It can!
>   pandoc --csl mystyle.csl --bibliography mybib.bib \
>   -s -S input.txt -o output.tex
>
>   Ah ha! Thanks John, I will put that into action immediately!
>   It’s the simple omission of the --biblatex switch that does this, yes?

Right, --biblatex and --natbib cause pandoc to emit native
biblatex or natbib citation commands.  Without these,
pandoc-citeproc is used to process citations using the
CSL stylesheet.

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Re: Academic Latex PDF Export

[Scot Mcphee]

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> On 04 Jan 2017, at 02:26 , John MacFarlane <jgm-TVLZxgkOlNX2fBVCVOL8/A@public.gmane.org> wrote:
> 
> +++ Scot Mcphee [Jan 03 17 21:37 ]:
>>  On 03 Jan 2017, at 20:12 , John MacFarlane <[1]jgm-TVLZxgkOlNX2fBVCVOL8/A@public.gmane.org> wrote:
>> 
>>  +++ Scot Mcphee [Jan 03 17 14:35 ]:
>> 
>>     One thing I have found is that the CSL format is better at
>>    producing
>>     certain types of citations/bibliography than the formats available
>>    in
>>     “pure” biblatex format. I would love pandoc to be able to produce a
>>     latex file that contains the already formatted citations and
>>     bibliography (according to the CSL style specified).
>> 
>>  It can!
>>  pandoc --csl mystyle.csl --bibliography mybib.bib \
>>  -s -S input.txt -o output.tex
>> 
>>  Ah ha! Thanks John, I will put that into action immediately!
>>  It’s the simple omission of the --biblatex switch that does this, yes?
> 
> Right, --biblatex and --natbib cause pandoc to emit native
> biblatex or natbib citation commands.  Without these,
> pandoc-citeproc is used to process citations using the
> CSL stylesheet.

Is there any way to automatically enclose the generated bibliography in an environment name?


--
Scot Mcphee
Computer Programmer, Classics PhD.
p +61 412 957414
e scot.mcphee-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org
w http://autonomous.org/
t @scotartt


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Re: Academic Latex PDF Export

[Sergio Correia]

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From the manpage of pandoc-citeproc, it adds a Div with id "refs":

https://github.com/jgm/pandoc-citeproc/blob/master/man/pandoc-citeproc.1.md#filter-mode

So you could run another filter right after pandoc-citeproc, and use it to 
add the latex content you need right before and after the Div (i.e. 
\begin{..} )

On Thursday, January 5, 2017 at 2:58:17 AM UTC-5, Scot Mcphee wrote:
>
>
>
> On 04 Jan 2017, at 02:26 , John MacFarlane <j...-TVLZxgkOlNX2fBVCVOL8/A@public.gmane.org 
> <javascript:>> wrote:
>
> +++ Scot Mcphee [Jan 03 17 21:37 ]:
>
>  On 03 Jan 2017, at 20:12 , John MacFarlane <[1]j...-TVLZxgkOlNX2fBVCVOL8/A@public.gmane.org 
> <javascript:>> wrote:
>
>  +++ Scot Mcphee [Jan 03 17 14:35 ]:
>
>     One thing I have found is that the CSL format is better at
>    producing
>     certain types of citations/bibliography than the formats available
>    in
>     “pure” biblatex format. I would love pandoc to be able to produce a
>     latex file that contains the already formatted citations and
>     bibliography (according to the CSL style specified).
>
>  It can!
>  pandoc --csl mystyle.csl --bibliography mybib.bib \
>  -s -S input.txt -o output.tex
>
>  Ah ha! Thanks John, I will put that into action immediately!
>  It’s the simple omission of the --biblatex switch that does this, yes?
>
>
> Right, --biblatex and --natbib cause pandoc to emit native
> biblatex or natbib citation commands.  Without these,
> pandoc-citeproc is used to process citations using the
> CSL stylesheet.
>
>
> Is there any way to automatically enclose the generated bibliography in an 
> environment name?
>
>
> --
> Scot Mcphee
> Computer Programmer, Classics PhD.
> p +61 412 957414
> e scot....-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org <javascript:>
> w http://autonomous.org/
> t @scotartt
>
>
>

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Re: Academic Latex PDF Export

[John MacFarlane]

+++ Scot Mcphee [Jan 05 17 17:58 ]:

>   Is there any way to automatically enclose the generated bibliography in
>   an environment name?

You could do it with a custom filter.

filter order while processing citeproc bibliography in a latex environment

[Scot Mcphee]

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> On 06 Jan 2017, at 07:22 , John MacFarlane <jgm-TVLZxgkOlNX2fBVCVOL8/A@public.gmane.org> wrote:
> 
> +++ Scot Mcphee [Jan 05 17 17:58 ]:
> 
>>  Is there any way to automatically enclose the generated bibliography in
>>  an environment name?
> 
> You could do it with a custom filter.


Hi John

I’ve been looking at this (using python) but when the filter gets the AST, the bibliography output at the end isn’t yet added to it (and the citation is still unprocessed), if I specified just my filter on the command line.  I experimented a bit and found I could control the order of the filters by specifying multiple - -filter options, with citeproc specified first, like this:

pandoc -f markdown -t latex --smart --standalone --latex-engine=xelatex --bibliography=./mybib.bib  --filter pandoc-citeproc --filter ./myfilter.py  input.md

Is this the approved way to control the filter execution order?

Thanks
Scot

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Computer Programmer, Classics PhD.
p +61 412 957414
e scot.mcphee-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org
w http://autonomous.org/
t @scotartt

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Re: filter order while processing citeproc bibliography in a latex environment

[John MacFarlane]

Yes, filters execute in the order on the command line
command line.

+++ Scot Mcphee [Jan 08 17 15:03 ]:
>   On 06 Jan 2017, at 07:22 , John MacFarlane <[1]jgm-TVLZxgkOlNX2fBVCVOL8/A@public.gmane.org> wrote:
>
>   +++ Scot Mcphee [Jan 05 17 17:58 ]:
>
>      Is there any way to automatically enclose the generated
>     bibliography in
>      an environment name?
>
>   You could do it with a custom filter.
>
>   Hi John
>   I’ve been looking at this (using python) but when the filter gets the
>   AST, the bibliography output at the end isn’t yet added to it (and the
>   citation is still unprocessed), if I specified just my filter on the
>   command line.  I experimented a bit and found I could control the order
>   of the filters by specifying multiple - -filter options, with citeproc
>   specified first, like this:
>
>   pandoc -f markdown -t latex --smart --standalone --latex-engine=xelatex
>   --bibliography=./mybib.bib  --filter pandoc-citeproc --filter
>   ./myfilter.py  input.md
>
>   Is this the approved way to control the filter execution order?
>   Thanks
>   Scot
>   --
>   Scot Mcphee
>   Computer Programmer, Classics PhD.
>   p +61 412 957414
>   e [2]scot.mcphee-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org
>   w [3]http://autonomous.org/
>   t @scotartt
>
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>References
>
>   1. mailto:jgm-TVLZxgkOlNX2fBVCVOL8/A@public.gmane.org
>   2. mailto:scot.mcphee-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org
>   3. http://autonomous.org/
>   4. mailto:pandoc-discuss+unsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
>   5. mailto:pandoc-discuss-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
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