Sorry, you've probably already answered this along the way, but I'm
confused about the "text" that you refer to. Perhaps you could attach a
JSON AST that includes a citation with all the desired information from a
run that DOESN'T use your filter? I'm unclear where in the AST to find the
information that you want (and is missing). I had assumed that it must be
in cite.citations but apparently not.

On Fri, 20 Aug 2021 at 18:25, Leena Murgai <leenamurgai-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org> wrote:

> So I've attached some screenshots in case it helps. You can see that the
> marginnote contains only the [linked_item_number] of the citation, the
> rest is missing. Here's the filter I used:
>
> function Cite(el)
>   marginnote = pandoc.Span(el.content)
>   marginnote.classes[1] = 'marginnote'
>   return {pandoc.Span(el.content), marginnote}
> end
>
>
>
> On Friday, 20 August 2021 at 10:06:30 UTC-7 Leena Murgai wrote:
>
>> Hello again Bastien,
>>
>> I just tried your code, it does something similar to mine (but clearly
>> you code is nicer :). It's missing the text that makes up the citation
>> block in the bibligraphy. To be clear I want the whole block (or inline?)
>> that appears in the bibliography in my marginnote.
>>
>> Cheers!
>>
>> On Friday, 20 August 2021 at 10:00:56 UTC-7 Leena Murgai wrote:
>>
>>> Thanks  William.
>>>
>>> These are the filters I'm using:
>>>
>>> 1. tex2html/filters/date.lua            # Replace date with today's date
>>> if it's empty above #
>>> 2. tex2html/filters/texref.lua          # Cleanup pandoc and
>>> pandoc-crossref conflicts #
>>> 3. pandoc-crossref                      #
>>> https://github.com/lierdakil/pandoc-crossref #
>>> 4. citeproc                             # If you need control over when
>>> the citeproc processing #
>>> 5. pandoc-sidenote                      #
>>> https://github.com/jez/pandoc-sidenote #
>>> 6. tex2html/filters/margincitations.lua # put citations in marginnotes #
>>>
>>> Thanks Pedro.
>>>
>>> I'm already using pandoc-sidenote :). What I actually want is a
>>> marginnote. If I turn them into footnotes before running pandoc-sidenote, I
>>> end up with a sidenote rather than a marginnote which gets a superscript
>>> label. This isn't what I want. I want to keep the [linked_item_number] (provided
>>> by citeproc) and put that in the (unnumbered) marginnote (with the rest of
>>> the ). RawInline let's me do that. I just can't access the text.
>>> On Friday, 20 August 2021 at 09:44:46 UTC-7 pedro....-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org wrote:
>>>
>>>> Jake Zimmerman’s pandoc-sidenote filter just takes every footnote as a
>>>> whole and converts it to a sidenote <span>. Unless you want separate
>>>> streams for regular footnotes and citation sidenotes, it might be useful:
>>>> https://github.com/jez/pandoc-sidenote/blob/master/src/Text/Pandoc/SideNote.hs
>>>>
>>>> Em sexta-feira, 20 de agosto de 2021 às 17:37:55 UTC+1, William Lupton
>>>> escreveu:
>>>>
>>>>> Not sure if this helps, but here's a simple example showing a somewhat
>>>>> readable dump of the AST before and after citeproc. I think only
>>>>> cite.content has changed. I suspect that your problem is something else.
>>>>>
>>>>> *% *cat cite.md
>>>>>
>>>>> @RFC1149
>>>>>
>>>>>
>>>>> *% *LUA_PATH=../?.lua pandoc -L rep.lua --citeproc -L rep.lua cite.md
>>>>>
>>>>> (#) meta {}
>>>>>
>>>>> (#) blocks {
>>>>>
>>>>>   [1] content: Para {
>>>>>
>>>>>     [1] Cite {
>>>>>
>>>>>       citations: {
>>>>>
>>>>>         [1] {
>>>>>
>>>>>           hash: 0
>>>>>
>>>>>           id: "RFC1149"
>>>>>
>>>>>           mode: "AuthorInText"
>>>>>
>>>>>           note_num: 1
>>>>>
>>>>>           prefix: {}
>>>>>
>>>>>           suffix: {}
>>>>>
>>>>>         }
>>>>>
>>>>>       }
>>>>>
>>>>>       content: {
>>>>>
>>>>>         [1] Str text: "@RFC1149"
>>>>>
>>>>>       }
>>>>>
>>>>>     }
>>>>>
>>>>>   }
>>>>>
>>>>> }
>>>>>
>>>>> [WARNING] Citeproc: citation RFC1149 not found
>>>>>
>>>>> (#) meta {}
>>>>>
>>>>> (#) blocks {
>>>>>
>>>>>   [1] content: Para {
>>>>>
>>>>>     [1] Cite {
>>>>>
>>>>>       citations: {
>>>>>
>>>>>         [1] {
>>>>>
>>>>>           hash: 0
>>>>>
>>>>>           id: "RFC1149"
>>>>>
>>>>>           mode: "AuthorInText"
>>>>>
>>>>>           note_num: 1
>>>>>
>>>>>           prefix: {}
>>>>>
>>>>>           suffix: {}
>>>>>
>>>>>         }
>>>>>
>>>>>       }
>>>>>
>>>>>       content: {
>>>>>
>>>>>         [1] Str text: "("
>>>>>
>>>>>         [2] content: Strong {
>>>>>
>>>>>           [1] Str text: "RFC1149?"
>>>>>
>>>>>         }
>>>>>
>>>>>         [3] Str text: ")"
>>>>>
>>>>>       }
>>>>>
>>>>>     }
>>>>>
>>>>>   }
>>>>>
>>>>> }
>>>>>
>>>>> <p><span class="citation"
>>>>> data-cites="RFC1149">(<strong>RFC1149?</strong>)</span></p>
>>>>>
>>>>> On Fri, 20 Aug 2021 at 17:14, Leena Murgai <leena...-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org> wrote:
>>>>>
>>>>>> I'm running it after citeproc since I need the citation values.
>>>>>>
>>>>>> On Friday, 20 August 2021 at 09:12:06 UTC-7 Leena Murgai wrote:
>>>>>>
>>>>>>> Maybe the order I run the filters in matters?
>>>>>>>
>>>>>>> On Friday, 20 August 2021 at 09:07:24 UTC-7 Leena Murgai wrote:
>>>>>>>
>>>>>>>> Yeah, I tried looking there, I couldn't find what I wanted. I'm
>>>>>>>> sure I'm missing something.
>>>>>>>>
>>>>>>>> The question is how to access it? As in what's the code? For
>>>>>>>> example, each citation (
>>>>>>>> https://pandoc.org/lua-filters.html#type-citation) has the fields
>>>>>>>>  id, mode, prefix, suffix, note_num, hash. Which one contains the
>>>>>>>> text I want? What's the code to get the list of inlines I want
>>>>>>>> (corresponding to the text in the citation)?
>>>>>>>> On Friday, 20 August 2021 at 08:59:52 UTC-7 William Lupton wrote:
>>>>>>>>
>>>>>>>>> Do you mean the citations themselves? These are in el.citations.
>>>>>>>>> See https://pandoc.org/lua-filters.html#type-cite and
>>>>>>>>> https://pandoc.org/lua-filters.html#type-citation.
>>>>>>>>>
>>>>>>>>> On Fri, 20 Aug 2021 at 16:36, Leena Murgai <leena...-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org>
>>>>>>>>> wrote:
>>>>>>>>>
>>>>>>>>>> So far I have the following, which puts the [linked_item_number]
>>>>>>>>>> in the passage and in the marginnote but I'm missing the rest of the
>>>>>>>>>> text_that_goes_in_the_bibliography.
>>>>>>>>>>
>>>>>>>>>> function Cite(el)
>>>>>>>>>>   return {
>>>>>>>>>>     pandoc.Span(el.content),
>>>>>>>>>>     pandoc.RawInline('html5', ' <span class = "marginnote">'),
>>>>>>>>>>     pandoc.Span(el.content),
>>>>>>>>>>     pandoc.RawInline('html5', ' </span>')
>>>>>>>>>>     }
>>>>>>>>>> end
>>>>>>>>>>
>>>>>>>>>> On Thursday, 19 August 2021 at 20:32:11 UTC-7 Leena Murgai wrote:
>>>>>>>>>>
>>>>>>>>>>> Hi there,
>>>>>>>>>>>
>>>>>>>>>>> I'm converting from LaTeX to HTML5. I'd like to put my citations
>>>>>>>>>>> in 'sidenote's rather than at the end of the doc. In practice, this just
>>>>>>>>>>> means I want the output html: to look like
>>>>>>>>>>>
>>>>>>>>>>> [linked_item_number] <span class=marginnote>
>>>>>>>>>>> text_that_goes_in_the_bibliography</span>
>>>>>>>>>>>
>>>>>>>>>>> How do I access the element that goes into the citation, i.e.
>>>>>>>>>>> text_that_goes_in_the_bibliography?
>>>>>>>>>>>
>>>>>>>>>>> Any advice appreciated.
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>> --
>>>>>>>>>> You received this message because you are subscribed to the
>>>>>>>>>> Google Groups "pandoc-discuss" group.
>>>>>>>>>> To unsubscribe from this group and stop receiving emails from it,
>>>>>>>>>> send an email to pandoc-discus...-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org
>>>>>>>>>> To view this discussion on the web visit
>>>>>>>>>> https://groups.google.com/d/msgid/pandoc-discuss/eda3d7b4-befd-4f42-9455-8a37373d33a6n%40googlegroups.com
>>>>>>>>>> <https://groups.google.com/d/msgid/pandoc-discuss/eda3d7b4-befd-4f42-9455-8a37373d33a6n%40googlegroups.com?utm_medium=email&utm_source=footer>
>>>>>>>>>> .
>>>>>>>>>>
>>>>>>>>> --
>>>>>> You received this message because you are subscribed to the Google
>>>>>> Groups "pandoc-discuss" group.
>>>>>> To unsubscribe from this group and stop receiving emails from it,
>>>>>> send an email to pandoc-discus...-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org
>>>>>>
>>>>> To view this discussion on the web visit
>>>>>> https://groups.google.com/d/msgid/pandoc-discuss/3106cf1d-5ae3-411f-b92a-c14153d58e49n%40googlegroups.com
>>>>>> <https://groups.google.com/d/msgid/pandoc-discuss/3106cf1d-5ae3-411f-b92a-c14153d58e49n%40googlegroups.com?utm_medium=email&utm_source=footer>
>>>>>> .
>>>>>>
>>>>> --
> You received this message because you are subscribed to the Google Groups
> "pandoc-discuss" group.
> To unsubscribe from this group and stop receiving emails from it, send an
> email to pandoc-discuss+unsubscribe-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org
> To view this discussion on the web visit
> https://groups.google.com/d/msgid/pandoc-discuss/eb59834b-d3e8-4dc4-9a66-0eb8c0f3e225n%40googlegroups.com
> <https://groups.google.com/d/msgid/pandoc-discuss/eb59834b-d3e8-4dc4-9a66-0eb8c0f3e225n%40googlegroups.com?utm_medium=email&utm_source=footer>
> .
>

-- 
You received this message because you are subscribed to the Google Groups "pandoc-discuss" group.
To unsubscribe from this group and stop receiving emails from it, send an email to pandoc-discuss+unsubscribe-/JYPxA39Uh5TLH3MbocFF+G/Ez6ZCGd0@public.gmane.org
To view this discussion on the web visit https://groups.google.com/d/msgid/pandoc-discuss/CAEe_xxjLevSn7YgLpg4LTdmjD_duxwm%2BZ3qXEGM%2BzSuwHUT3fg%40mail.gmail.com.