Re: pandoc-crossref not playing nice with header includes

[A A <amine.aboufirass-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org>]

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I guess you could think of it this way: My goal was to combine
functionality from the 3 different filters in the way I described, since no
filter exists which can do all of those things in one go.  My first attempt
at achieving that goal was very crude, since I sequentially applied the
three filters and expected them to be compatible with each other. I ran
into the compilation error at that point, which is why I started this
thread. Upon further discussion/thought, I started to realize that even if
I do fix the compilation error (which is a LaTeX problem), that doesn't
guarantee that the functionality will be combined in the way I expect
(which is a pandoc/Lua/AST problem).

On Tue, 7 Mar 2023 at 20:19, <bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org> wrote:

> Recalling your original post:
>
> > I get an error upon compilation, because pandoc-crossref defines its own
> > header include which gets overwritten by my -H header.tex.
>
> Do you mean now that you resolved this problem and ran into another one?
> They are distinct issues, even if they affect you simultaneously, aren't
> they?
>
> Le Tuesday 07 March 2023 à 07:28:26PM, A A a écrit :
> > I’m already familiar with pandoc templates, but I don’t think they are
> the
> > solution here. You might recall I’m using 3 distinct filters, namely
> > pandoc-crossref.lua, minted.lua, include-code-files.lua. I’m using each
> because
> > of some functionality it provides:
> >
> >   • pandoc-crossref.lua: The ability to cross-reference listings and
> caption
> >     them
> >   • minted.lua: The ability to break long code lines within a listing.
> >   • include-code-files.lua: The ability to include external files in a
> listing.
> >
> > I expected that using these filters in unison would result in an
> intersection
> > of the mentioned functionality. However, this is incorrect. The
> underlying
> > issue here is that they all act on the same AST element (i.e. CodeBlock)
> and
> > calling them sequentially like that will inevitably result in conflicts.
> >
> > As you can see it doesn’t really matter what I do with the template or
> the
> > header, because neither of those two things act on the AST.
> >
> >
> > On Tue, 7 Mar 2023 at 16:51, Bastien DUMONT <[1]
> bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org>
> > wrote:
> >
> >     You can get the default template for LaTeX with pandoc -D latex,
> customize
> >     it according to your needs and specify the resulting file with
> --template
> >     in the command. There is nothing specific here for pandoc-crossrefs.
> See
> >     the section about templates in the manual of Pandoc for more details.
> >
> >     Le Tuesday 07 March 2023 à 02:06:17PM, A A a écrit :
> >     >     You can include it in an external metadata file referred to
> via the
> >     >     —metadata-file option
> >     >
> >     > I believe that would still be a YAML file with weird syntax like
> this?
> >     >
> >     > header-includes:
> >     > - |
> >     >   ~~~{=latex}
> >     >   \let\oldsection\section
> >     >   \renewcommand{\section}[1]{\clearpage\oldsection{#1}}
> >     >   ~~~
> >     >
> >     > If so then yes, I definitely prefer doing my own header.tex. But
> this
> >     would
> >     > have to include all the content necessary for pandoc-crossref to
> work
> >     properly.
> >     > Any ideas where I could find this content? I briefly skimmed the
> >     > pandoc-crossref repo but didn’t find anything obvious…
> >     >
> >     >
> >     > On Tue, 7 Mar 2023 at 12:16, Bastien DUMONT <[1][2]
> >     bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org>
> >     > wrote:
> >     >
> >     >     You can include it in an external metadata file referred to
> via the
> >     >     --metadata-file option. However, if you customize the LaTeX
> preamble
> >     >     heavily, it may be preferable to use a custom template
> including the
> >     >     content of header.tex.
> >     >
> >     >     Le Tuesday 07 March 2023 à 12:07:19PM, A A a écrit :
> >     >     > That would force me to put my header content within my
> markdown
> >     file and
> >     >     remove
> >     >     > "header.tex" completely. I would very much prefer to keep
> them as
> >     >     separate
> >     >     > files.
> >     >     >
> >     >     > The header.tex for my use case ia much more involved.
> Including it
> >     inside
> >     >     the
> >     >     > markdowm YAML block like that would be quite ugly IMO.
> >     >     >
> >     >     >
> >     >     >
> >     >     >
> >     >     >
> >     >     > On Tue, 7 Mar 2023, 10:16 Bastien DUMONT, <[1][2]
> >     >     [3]bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org> wrote:
> >     >     >
> >     >     >     Since you don't use a custom template, you don't have to
> add
> >     $for
> >     >     >     (header-includes)$ etc. anywhere: it is already included
> in the
> >     >     default
> >     >     >     LaTeX template.
> >     >     >     The answer for your use case is here: [2][3][4]https://
> >     github.com/
> >     >     lierdakil/
> >     >     >     pandoc-crossref/issues/47#issuecomment-614404532
> >     >     >
> >     >     >     Le Tuesday 07 March 2023 à 10:02:38AM, A A a écrit :
> >     >     >     > Files
> >     >     >     >
> >     >     >     > test.py
> >     >     >     >
> >     >     >     > def f(x):
> >     >     >     >     return x
> >     >     >     >
> >     >     >     > test.md
> >     >     >     >
> >     >     >     > ~~~{
> >     >     >     >   #lst:test
> >     >     >     >   .py
> >     >     >     >   include="test.py"
> >     >     >     >   caption=`test.py`
> >     >     >     > }
> >     >     >     > ~~~
> >     >     >     >
> >     >     >     > header.tex
> >     >     >     >
> >     >     >     > \usepackage{minted}
> >     >     >     >
> >     >     >     > \definecolor{bg}{rgb}{0.85, 0.85. 0.85}
> >     >     >     > \setminted{breaklines=true, bgcolor=bg, breakanywhere}
> >     >     >     >
> >     >     >     > Compilation
> >     >     >     >
> >     >     >     > I’m compiling with:
> >     >     >     >
> >     >     >     > pandoc -s -F pandoc-crossref -L include-code-files.lua
> -L
> >     >     minted.lua -H
> >     >     >     header.tex --from markdown --to latex test.md -o test.tex
> >     >     >     > latexmk --shell-escape -pdflatex test.tex
> >     >     >     >
> >     >     >     > I get an error upon compilation, because
> pandoc-crossref
> >     defines
> >     >     its own
> >     >     >     header
> >     >     >     > include which gets overwritten by my -H header.tex.
> This [1]
> >     link
> >     >     provides
> >     >     >     more
> >     >     >     > information.
> >     >     >     >
> >     >     >     > I tried the solution proposed by @lierdakil in the link
> >     provided
> >     >     but get
> >     >     >     an
> >     >     >     > error:
> >     >     >     >
> >     >     >     >     ! LaTeX Error: Missing \begin{document}.
> >     >     >     >
> >     >     >     >     See the LaTeX manual or LaTeX Companion for
> explanation.
> >     >     >     >     Type H for immediate help.
> >     >     >     >
> >     >     >     >     l.97 $
> >     >     >     >     for(header-includes)$
> >     >     >     >     ?
> >     >     >     >
> >     >     >     > So I’m at a bit of a loss regarding what to do here,
> Any
> >     pointers
> >     >     >     welcome.
> >     >     >     > Thanks
> >     >     >     >
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> >     >     >     > References:
> >     >     >     >
> >     >     >     > [1] [6][7][8]
> https://github.com/lierdakil/pandoc-crossref/
> >     issues/47
> >     >     >     > [2] mailto:[7][8][9]
> >     pandoc-discuss+unsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> >     >     >     > [3] [8][9][10]https://groups.google.com/d/msgid/
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> >     >     > References:
> >     >     >
> >     >     > [1] mailto:[16][17]bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org
> >     >     > [2] [17][18]
> https://github.com/lierdakil/pandoc-crossref/issues/47#
> >     >     issuecomment-614404532
> >     >     > [3] mailto:[18][19]
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> >     >     > [5] [20][21]http://40mail.gmail.com/
> >     >     > [6] [21][22]
> https://github.com/lierdakil/pandoc-crossref/issues/47
> >     >     > [7] mailto:[22][23]
> pandoc-discuss%2Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> >     >     > [8] [23][24]
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> >     > References:
> >     >
> >     > [1] mailto:[36]bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org
> >     > [2] mailto:[37]bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org
> >     > [3] [38]https://github.com/lierdakil/
> >     > [4] mailto:[39]pandoc-discuss%2Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> >     > [5] [40]https://groups.google.com/
> >     > [6] [41]http://40mail.gmail.com/
> >     > [7] [42]https://github.com/lierdakil/pandoc-crossref/issues/47
> >     > [8] mailto:[43]pandoc-discuss%2Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> >     > [9] [44]https://groups.google.com/d/msgid/pandoc-discuss/
> >     > [10] [45]http://40mail.gmail.com/
> >     > [11] mailto:[46]pandoc-discuss%2Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
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> >     > [16] mailto:[51]bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org
> >     > [17] [52]https://github.com/lierdakil/pandoc-crossref/issues/47#
> >     issuecomment-614404532
> >     > [18] mailto:[53]pandoc-discuss%252Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> >     > [19] [54]https://groups.google.com/d/msgid/
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> >     > [21] [56]https://github.com/lierdakil/pandoc-crossref/issues/47
> >     > [22] mailto:[57]pandoc-discuss%252Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
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> >
> > References:
> >
> > [1] mailto:bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org
> > [2] mailto:bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org
> > [3] mailto:bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org
> > [4] https://github.com/
> > [5] mailto:pandoc-discuss%2Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> > [6] http://groups.google.com/
> > [7] http://40mail.gmail.com/
> > [8] https://github.com/lierdakil/pandoc-crossref/issues/47
> > [9] mailto:pandoc-discuss%2Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> > [10] https://groups.google.com/d/msgid/pandoc-discuss/
> > [11] http://40mail.gmail.com/
> > [12] mailto:pandoc-discuss%2Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> > [13] http://groups.google.com/d/
> > [14] mailto:pandoc-discuss%2Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> > [15] http://groups.google.com/d/msgid/
> > [16] http://40mail.gmail.com/
> > [17] mailto:bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org
> > [18] https://github.com/lierdakil/pandoc-crossref/issues/47#
> > [19] mailto:pandoc-discuss%252Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> > [20] https://groups.google.com/d/msgid/
> > [21] http://40mail.gmail.com/
> > [22] https://github.com/lierdakil/pandoc-crossref/issues/47
> > [23] mailto:pandoc-discuss%252Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> > [24] https://groups.google.com/d/msgid/pandoc-discuss/
> > [25] http://40mail.gmail.com/
> > [26] mailto:pandoc-discuss%252Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> > [27] https://groups.google.com/d/msgid/pandoc-discuss/ZAcA4dThsf/
> > [28] mailto:pandoc-discuss%2Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> > [29] https://groups.google.com/d/msgid/pandoc-discuss/
> > [30] http://40mail.gmail.com/
> > [31] mailto:pandoc-discuss%2Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> > [32] https://groups.google.com/d/
> > [33] mailto:pandoc-discuss%2Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> > [34] https://groups.google.com/d/msgid/
> > [35] http://40mail.gmail.com/
> > [36] mailto:bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org
> > [37] mailto:bastien.dumont-VwIFZPTo/vqsTnJN9+BGXg@public.gmane.org
> > [38] https://github.com/lierdakil/
> > [39] mailto:pandoc-discuss%252Bunsubscribe-/JYPxA39Uh5TLH3MbocFFw@public.gmane.org
> > [40] https://groups.google.com/
> > [41] http://40mail.gmail.com/
> > [42] https://github.com/lierdakil/pandoc-crossref/issues/47
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